Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Pcdha3Q91Y16 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdha3Q91Y16 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.32■□□□□ 0.52
Pcdha3Q91Y16 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC18.32■□□□□ 0.52
Pcdha3Q91Y16 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.32■□□□□ 0.52
Pcdha3Q91Y16 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdha3Q91Y16 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdha3Q91Y16 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Pcdha3Q91Y16 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC18.32■□□□□ 0.52
Pcdha3Q91Y16 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdha3Q91Y16 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdha3Q91Y16 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdha3Q91Y16 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdha3Q91Y16 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdha3Q91Y16 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdha3Q91Y16 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdha3Q91Y16 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdha3Q91Y16 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdha3Q91Y16 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Pcdha3Q91Y16 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdha3Q91Y16 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.31■□□□□ 0.52
Pcdha3Q91Y16 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdha3Q91Y16 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdha3Q91Y16 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdha3Q91Y16 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdha3Q91Y16 Gm45560-201ENSMUST00000211492 1472 ntBASIC18.31■□□□□ 0.52
Pcdha3Q91Y16 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.31■□□□□ 0.52
Pcdha3Q91Y16 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdha3Q91Y16 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdha3Q91Y16 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
Pcdha3Q91Y16 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Pcdha3Q91Y16 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Pcdha3Q91Y16 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC18.3■□□□□ 0.52
Pcdha3Q91Y16 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdha3Q91Y16 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdha3Q91Y16 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdha3Q91Y16 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdha3Q91Y16 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC18.3■□□□□ 0.52
Pcdha3Q91Y16 Arhgef33-211ENSMUST00000225658 473 ntBASIC18.3■□□□□ 0.52
Pcdha3Q91Y16 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdha3Q91Y16 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdha3Q91Y16 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdha3Q91Y16 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC18.3■□□□□ 0.52
Pcdha3Q91Y16 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdha3Q91Y16 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdha3Q91Y16 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC18.29■□□□□ 0.52
Pcdha3Q91Y16 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdha3Q91Y16 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdha3Q91Y16 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC18.29■□□□□ 0.52
Pcdha3Q91Y16 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.29■□□□□ 0.52
Pcdha3Q91Y16 Gm18025-201ENSMUST00000221733 862 ntBASIC18.29■□□□□ 0.52
Pcdha3Q91Y16 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdha3Q91Y16 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdha3Q91Y16 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdha3Q91Y16 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdha3Q91Y16 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdha3Q91Y16 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdha3Q91Y16 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdha3Q91Y16 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdha3Q91Y16 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdha3Q91Y16 Gm10418-201ENSMUST00000100943 576 ntBASIC18.28■□□□□ 0.52
Pcdha3Q91Y16 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdha3Q91Y16 Mir2861-201ENSMUST00000175539 82 ntBASIC18.28■□□□□ 0.52
Pcdha3Q91Y16 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC18.28■□□□□ 0.52
Pcdha3Q91Y16 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdha3Q91Y16 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdha3Q91Y16 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdha3Q91Y16 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdha3Q91Y16 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdha3Q91Y16 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Pcdha3Q91Y16 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Pcdha3Q91Y16 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.28■□□□□ 0.52
Pcdha3Q91Y16 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Pcdha3Q91Y16 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdha3Q91Y16 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.27■□□□□ 0.52
Pcdha3Q91Y16 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdha3Q91Y16 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC18.27■□□□□ 0.52
Pcdha3Q91Y16 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdha3Q91Y16 Gm6576-201ENSMUST00000169678 883 ntBASIC18.27■□□□□ 0.52
Pcdha3Q91Y16 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC18.27■□□□□ 0.52
Pcdha3Q91Y16 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdha3Q91Y16 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdha3Q91Y16 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pcdha3Q91Y16 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pcdha3Q91Y16 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Pcdha3Q91Y16 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pcdha3Q91Y16 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pcdha3Q91Y16 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdha3Q91Y16 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdha3Q91Y16 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdha3Q91Y16 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdha3Q91Y16 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdha3Q91Y16 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Pcdha3Q91Y16 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdha3Q91Y16 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdha3Q91Y16 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.26■□□□□ 0.51
Pcdha3Q91Y16 Gm5898-201ENSMUST00000121016 2071 ntBASIC18.26■□□□□ 0.51
Pcdha3Q91Y16 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdha3Q91Y16 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdha3Q91Y16 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms