Protein–RNA interactions for Protein: Q91Y12

Pcdha8, Protocadherin alpha 8, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8Q91Y12 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdha8Q91Y12 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdha8Q91Y12 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdha8Q91Y12 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdha8Q91Y12 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdha8Q91Y12 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdha8Q91Y12 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdha8Q91Y12 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdha8Q91Y12 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdha8Q91Y12 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.07■□□□□ 0.32
Pcdha8Q91Y12 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdha8Q91Y12 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdha8Q91Y12 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdha8Q91Y12 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdha8Q91Y12 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdha8Q91Y12 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdha8Q91Y12 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdha8Q91Y12 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdha8Q91Y12 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdha8Q91Y12 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdha8Q91Y12 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.07■□□□□ 0.32
Pcdha8Q91Y12 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdha8Q91Y12 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Pcdha8Q91Y12 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdha8Q91Y12 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdha8Q91Y12 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdha8Q91Y12 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdha8Q91Y12 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdha8Q91Y12 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.06■□□□□ 0.32
Pcdha8Q91Y12 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdha8Q91Y12 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdha8Q91Y12 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.06■□□□□ 0.32
Pcdha8Q91Y12 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdha8Q91Y12 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdha8Q91Y12 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.06■□□□□ 0.32
Pcdha8Q91Y12 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdha8Q91Y12 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdha8Q91Y12 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdha8Q91Y12 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdha8Q91Y12 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdha8Q91Y12 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdha8Q91Y12 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.05■□□□□ 0.32
Pcdha8Q91Y12 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.05■□□□□ 0.32
Pcdha8Q91Y12 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdha8Q91Y12 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdha8Q91Y12 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdha8Q91Y12 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdha8Q91Y12 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdha8Q91Y12 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.05■□□□□ 0.32
Pcdha8Q91Y12 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17.05■□□□□ 0.32
Pcdha8Q91Y12 Gm11249-201ENSMUST00000117071 859 ntBASIC17.05■□□□□ 0.32
Pcdha8Q91Y12 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdha8Q91Y12 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdha8Q91Y12 Mtag2-201ENSMUST00000058665 714 ntBASIC17.05■□□□□ 0.32
Pcdha8Q91Y12 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdha8Q91Y12 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdha8Q91Y12 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdha8Q91Y12 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Pcdha8Q91Y12 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdha8Q91Y12 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdha8Q91Y12 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdha8Q91Y12 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdha8Q91Y12 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdha8Q91Y12 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdha8Q91Y12 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdha8Q91Y12 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdha8Q91Y12 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.04■□□□□ 0.32
Pcdha8Q91Y12 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdha8Q91Y12 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdha8Q91Y12 Gm10418-201ENSMUST00000100943 576 ntBASIC17.04■□□□□ 0.32
Pcdha8Q91Y12 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Pcdha8Q91Y12 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdha8Q91Y12 Gm10138-203ENSMUST00000206952 366 ntBASIC17.04■□□□□ 0.32
Pcdha8Q91Y12 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdha8Q91Y12 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdha8Q91Y12 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdha8Q91Y12 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
Pcdha8Q91Y12 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdha8Q91Y12 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdha8Q91Y12 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdha8Q91Y12 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdha8Q91Y12 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdha8Q91Y12 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.03■□□□□ 0.32
Pcdha8Q91Y12 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdha8Q91Y12 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Pcdha8Q91Y12 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdha8Q91Y12 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdha8Q91Y12 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdha8Q91Y12 Mir2861-201ENSMUST00000175539 82 ntBASIC17.03■□□□□ 0.32
Pcdha8Q91Y12 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.03■□□□□ 0.32
Pcdha8Q91Y12 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdha8Q91Y12 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Pcdha8Q91Y12 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdha8Q91Y12 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.03■□□□□ 0.32
Pcdha8Q91Y12 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Pcdha8Q91Y12 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdha8Q91Y12 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdha8Q91Y12 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdha8Q91Y12 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdha8Q91Y12 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms