Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb1Q91Y08 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb1Q91Y08 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb1Q91Y08 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC18.24■□□□□ 0.51
Pcdhb1Q91Y08 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb1Q91Y08 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb1Q91Y08 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb1Q91Y08 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb1Q91Y08 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.24■□□□□ 0.51
Pcdhb1Q91Y08 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.24■□□□□ 0.51
Pcdhb1Q91Y08 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Pcdhb1Q91Y08 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb1Q91Y08 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb1Q91Y08 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Pcdhb1Q91Y08 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb1Q91Y08 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
Pcdhb1Q91Y08 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb1Q91Y08 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb1Q91Y08 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Pcdhb1Q91Y08 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.23■□□□□ 0.51
Pcdhb1Q91Y08 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18.23■□□□□ 0.51
Pcdhb1Q91Y08 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC18.23■□□□□ 0.51
Pcdhb1Q91Y08 Gm44878-201ENSMUST00000205812 1295 ntBASIC18.23■□□□□ 0.51
Pcdhb1Q91Y08 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Pcdhb1Q91Y08 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb1Q91Y08 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.23■□□□□ 0.51
Pcdhb1Q91Y08 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb1Q91Y08 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb1Q91Y08 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb1Q91Y08 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb1Q91Y08 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.22■□□□□ 0.51
Pcdhb1Q91Y08 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb1Q91Y08 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
Pcdhb1Q91Y08 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb1Q91Y08 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.22■□□□□ 0.51
Pcdhb1Q91Y08 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb1Q91Y08 Gm42545-201ENSMUST00000202755 922 ntBASIC18.22■□□□□ 0.51
Pcdhb1Q91Y08 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC18.22■□□□□ 0.51
Pcdhb1Q91Y08 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb1Q91Y08 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb1Q91Y08 AC135637.1-201ENSMUST00000227750 365 ntBASIC18.22■□□□□ 0.51
Pcdhb1Q91Y08 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb1Q91Y08 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb1Q91Y08 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Pcdhb1Q91Y08 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Pcdhb1Q91Y08 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb1Q91Y08 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb1Q91Y08 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb1Q91Y08 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb1Q91Y08 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Pcdhb1Q91Y08 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb1Q91Y08 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb1Q91Y08 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb1Q91Y08 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.22■□□□□ 0.51
Pcdhb1Q91Y08 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb1Q91Y08 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Pcdhb1Q91Y08 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Pcdhb1Q91Y08 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhb1Q91Y08 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhb1Q91Y08 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC18.21■□□□□ 0.51
Pcdhb1Q91Y08 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhb1Q91Y08 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhb1Q91Y08 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhb1Q91Y08 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
Pcdhb1Q91Y08 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Pcdhb1Q91Y08 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.21■□□□□ 0.51
Pcdhb1Q91Y08 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhb1Q91Y08 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhb1Q91Y08 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhb1Q91Y08 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhb1Q91Y08 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhb1Q91Y08 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC18.21■□□□□ 0.51
Pcdhb1Q91Y08 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhb1Q91Y08 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Pcdhb1Q91Y08 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.2■□□□□ 0.5
Pcdhb1Q91Y08 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb1Q91Y08 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb1Q91Y08 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb1Q91Y08 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Pcdhb1Q91Y08 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb1Q91Y08 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.2■□□□□ 0.5
Pcdhb1Q91Y08 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb1Q91Y08 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb1Q91Y08 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC18.2■□□□□ 0.5
Pcdhb1Q91Y08 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb1Q91Y08 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb1Q91Y08 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb1Q91Y08 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb1Q91Y08 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb1Q91Y08 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Pcdhb1Q91Y08 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb1Q91Y08 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb1Q91Y08 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb1Q91Y08 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb1Q91Y08 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
Pcdhb1Q91Y08 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Pcdhb1Q91Y08 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb1Q91Y08 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.19■□□□□ 0.5
Pcdhb1Q91Y08 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC18.19■□□□□ 0.5
Pcdhb1Q91Y08 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms