Protein–RNA interactions for Protein: Q91Y02

Pcdhb18, Protocadherin beta-18, mousemouse

Predictions only

Length 792 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18Q91Y02 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdhb18Q91Y02 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.33■□□□□ 0.52
Pcdhb18Q91Y02 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Pcdhb18Q91Y02 Gm10013-201ENSMUST00000106074 672 ntBASIC18.33■□□□□ 0.52
Pcdhb18Q91Y02 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhb18Q91Y02 Gm23634-201ENSMUST00000175071 91 ntBASIC18.33■□□□□ 0.52
Pcdhb18Q91Y02 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC18.33■□□□□ 0.52
Pcdhb18Q91Y02 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhb18Q91Y02 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhb18Q91Y02 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb18Q91Y02 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb18Q91Y02 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb18Q91Y02 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb18Q91Y02 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC18.32■□□□□ 0.52
Pcdhb18Q91Y02 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb18Q91Y02 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb18Q91Y02 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC18.32■□□□□ 0.52
Pcdhb18Q91Y02 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Pcdhb18Q91Y02 Gm10819-201ENSMUST00000099988 561 ntBASIC18.32■□□□□ 0.52
Pcdhb18Q91Y02 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb18Q91Y02 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.32■□□□□ 0.52
Pcdhb18Q91Y02 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb18Q91Y02 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Pcdhb18Q91Y02 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb18Q91Y02 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Pcdhb18Q91Y02 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb18Q91Y02 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb18Q91Y02 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb18Q91Y02 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb18Q91Y02 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb18Q91Y02 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb18Q91Y02 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb18Q91Y02 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Pcdhb18Q91Y02 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb18Q91Y02 Gm18032-201ENSMUST00000222541 538 ntBASIC18.31■□□□□ 0.52
Pcdhb18Q91Y02 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb18Q91Y02 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb18Q91Y02 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb18Q91Y02 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC18.31■□□□□ 0.52
Pcdhb18Q91Y02 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb18Q91Y02 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Pcdhb18Q91Y02 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb18Q91Y02 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.3■□□□□ 0.52
Pcdhb18Q91Y02 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb18Q91Y02 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb18Q91Y02 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC18.3■□□□□ 0.52
Pcdhb18Q91Y02 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb18Q91Y02 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Pcdhb18Q91Y02 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb18Q91Y02 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.3■□□□□ 0.52
Pcdhb18Q91Y02 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb18Q91Y02 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.3■□□□□ 0.52
Pcdhb18Q91Y02 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb18Q91Y02 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb18Q91Y02 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb18Q91Y02 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb18Q91Y02 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb18Q91Y02 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb18Q91Y02 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb18Q91Y02 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.3■□□□□ 0.52
Pcdhb18Q91Y02 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb18Q91Y02 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb18Q91Y02 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb18Q91Y02 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.29■□□□□ 0.52
Pcdhb18Q91Y02 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb18Q91Y02 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
Pcdhb18Q91Y02 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb18Q91Y02 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb18Q91Y02 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb18Q91Y02 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
Pcdhb18Q91Y02 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb18Q91Y02 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb18Q91Y02 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb18Q91Y02 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC18.29■□□□□ 0.52
Pcdhb18Q91Y02 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb18Q91Y02 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.28■□□□□ 0.52
Pcdhb18Q91Y02 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.28■□□□□ 0.52
Pcdhb18Q91Y02 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb18Q91Y02 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb18Q91Y02 AA414768-201ENSMUST00000121924 1257 ntBASIC18.28■□□□□ 0.52
Pcdhb18Q91Y02 Gm6728-201ENSMUST00000178117 1065 ntBASIC18.28■□□□□ 0.52
Pcdhb18Q91Y02 Gm10459-201ENSMUST00000202708 1155 ntBASIC18.28■□□□□ 0.52
Pcdhb18Q91Y02 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Pcdhb18Q91Y02 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb18Q91Y02 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb18Q91Y02 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.27■□□□□ 0.52
Pcdhb18Q91Y02 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Pcdhb18Q91Y02 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb18Q91Y02 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb18Q91Y02 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb18Q91Y02 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb18Q91Y02 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb18Q91Y02 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb18Q91Y02 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb18Q91Y02 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb18Q91Y02 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb18Q91Y02 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb18Q91Y02 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.27■□□□□ 0.51
Pcdhb18Q91Y02 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Pcdhb18Q91Y02 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms