Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC16.88■□□□□ 0.29
Pcdhb20Q91XZ9 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC16.88■□□□□ 0.29
Pcdhb20Q91XZ9 Gm9484-201ENSMUST00000195892 1159 ntBASIC16.88■□□□□ 0.29
Pcdhb20Q91XZ9 Gm21814-202ENSMUST00000203277 873 ntBASIC16.88■□□□□ 0.29
Pcdhb20Q91XZ9 Gm4974-201ENSMUST00000209974 875 ntBASIC16.88■□□□□ 0.29
Pcdhb20Q91XZ9 Arhgef4-208ENSMUST00000211073 171 ntBASIC16.88■□□□□ 0.29
Pcdhb20Q91XZ9 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb20Q91XZ9 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Pcdhb20Q91XZ9 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb20Q91XZ9 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb20Q91XZ9 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Pcdhb20Q91XZ9 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb20Q91XZ9 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb20Q91XZ9 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb20Q91XZ9 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb20Q91XZ9 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb20Q91XZ9 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Pcdhb20Q91XZ9 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.87■□□□□ 0.29
Pcdhb20Q91XZ9 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Pcdhb20Q91XZ9 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.87■□□□□ 0.29
Pcdhb20Q91XZ9 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb20Q91XZ9 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb20Q91XZ9 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb20Q91XZ9 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC16.87■□□□□ 0.29
Pcdhb20Q91XZ9 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.87■□□□□ 0.29
Pcdhb20Q91XZ9 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb20Q91XZ9 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.87■□□□□ 0.29
Pcdhb20Q91XZ9 Gm42726-201ENSMUST00000202274 1286 ntTSL 5 BASIC16.87■□□□□ 0.29
Pcdhb20Q91XZ9 4930513D17Rik-203ENSMUST00000202800 1159 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb20Q91XZ9 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC16.87■□□□□ 0.29
Pcdhb20Q91XZ9 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC16.87■□□□□ 0.29
Pcdhb20Q91XZ9 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb20Q91XZ9 Gm5417-201ENSMUST00000079706 384 ntBASIC16.87■□□□□ 0.29
Pcdhb20Q91XZ9 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb20Q91XZ9 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb20Q91XZ9 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb20Q91XZ9 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb20Q91XZ9 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC16.87■□□□□ 0.29
Pcdhb20Q91XZ9 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb20Q91XZ9 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb20Q91XZ9 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb20Q91XZ9 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb20Q91XZ9 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb20Q91XZ9 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb20Q91XZ9 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb20Q91XZ9 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb20Q91XZ9 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb20Q91XZ9 Gm23958-201ENSMUST00000157207 105 ntBASIC16.86■□□□□ 0.29
Pcdhb20Q91XZ9 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC16.86■□□□□ 0.29
Pcdhb20Q91XZ9 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC16.86■□□□□ 0.29
Pcdhb20Q91XZ9 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb20Q91XZ9 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb20Q91XZ9 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb20Q91XZ9 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb20Q91XZ9 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb20Q91XZ9 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Pcdhb20Q91XZ9 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb20Q91XZ9 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb20Q91XZ9 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb20Q91XZ9 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb20Q91XZ9 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Pcdhb20Q91XZ9 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb20Q91XZ9 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb20Q91XZ9 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb20Q91XZ9 Gm13401-201ENSMUST00000117074 291 ntBASIC16.85■□□□□ 0.29
Pcdhb20Q91XZ9 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb20Q91XZ9 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.85■□□□□ 0.29
Pcdhb20Q91XZ9 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb20Q91XZ9 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC16.85■□□□□ 0.29
Pcdhb20Q91XZ9 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC16.85■□□□□ 0.29
Pcdhb20Q91XZ9 Gm43332-201ENSMUST00000202511 1044 ntBASIC16.85■□□□□ 0.29
Pcdhb20Q91XZ9 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb20Q91XZ9 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Pcdhb20Q91XZ9 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb20Q91XZ9 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
Pcdhb20Q91XZ9 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Pcdhb20Q91XZ9 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb20Q91XZ9 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Pcdhb20Q91XZ9 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb20Q91XZ9 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb20Q91XZ9 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb20Q91XZ9 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
Pcdhb20Q91XZ9 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Pcdhb20Q91XZ9 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb20Q91XZ9 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb20Q91XZ9 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb20Q91XZ9 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Pcdhb20Q91XZ9 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb20Q91XZ9 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
Pcdhb20Q91XZ9 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb20Q91XZ9 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC16.84■□□□□ 0.29
Pcdhb20Q91XZ9 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb20Q91XZ9 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC16.84■□□□□ 0.29
Pcdhb20Q91XZ9 AC106830.1-201ENSMUST00000228032 1003 ntBASIC16.84■□□□□ 0.29
Pcdhb20Q91XZ9 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb20Q91XZ9 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb20Q91XZ9 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb20Q91XZ9 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb20Q91XZ9 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb20Q91XZ9 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms