Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Pcdhb3Q91XZ7 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb3Q91XZ7 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb3Q91XZ7 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.51■□□□□ 0.39
Pcdhb3Q91XZ7 CT030146.1-201ENSMUST00000220919 217 ntBASIC17.51■□□□□ 0.39
Pcdhb3Q91XZ7 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb3Q91XZ7 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb3Q91XZ7 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb3Q91XZ7 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.51■□□□□ 0.39
Pcdhb3Q91XZ7 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Pcdhb3Q91XZ7 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb3Q91XZ7 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb3Q91XZ7 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Pcdhb3Q91XZ7 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb3Q91XZ7 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.5■□□□□ 0.39
Pcdhb3Q91XZ7 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb3Q91XZ7 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb3Q91XZ7 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Pcdhb3Q91XZ7 Spcs1-207ENSMUST00000228767 1008 ntBASIC17.5■□□□□ 0.39
Pcdhb3Q91XZ7 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb3Q91XZ7 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb3Q91XZ7 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb3Q91XZ7 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.5■□□□□ 0.39
Pcdhb3Q91XZ7 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.5■□□□□ 0.39
Pcdhb3Q91XZ7 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb3Q91XZ7 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb3Q91XZ7 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb3Q91XZ7 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb3Q91XZ7 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.49■□□□□ 0.39
Pcdhb3Q91XZ7 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb3Q91XZ7 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.49■□□□□ 0.39
Pcdhb3Q91XZ7 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb3Q91XZ7 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb3Q91XZ7 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb3Q91XZ7 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb3Q91XZ7 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Pcdhb3Q91XZ7 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb3Q91XZ7 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb3Q91XZ7 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.49■□□□□ 0.39
Pcdhb3Q91XZ7 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb3Q91XZ7 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb3Q91XZ7 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Pcdhb3Q91XZ7 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Pcdhb3Q91XZ7 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb3Q91XZ7 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb3Q91XZ7 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb3Q91XZ7 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb3Q91XZ7 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb3Q91XZ7 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb3Q91XZ7 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Pcdhb3Q91XZ7 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb3Q91XZ7 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Pcdhb3Q91XZ7 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb3Q91XZ7 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb3Q91XZ7 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb3Q91XZ7 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.48■□□□□ 0.39
Pcdhb3Q91XZ7 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Pcdhb3Q91XZ7 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb3Q91XZ7 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb3Q91XZ7 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb3Q91XZ7 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb3Q91XZ7 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb3Q91XZ7 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb3Q91XZ7 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb3Q91XZ7 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb3Q91XZ7 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb3Q91XZ7 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb3Q91XZ7 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb3Q91XZ7 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb3Q91XZ7 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb3Q91XZ7 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.47■□□□□ 0.39
Pcdhb3Q91XZ7 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb3Q91XZ7 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb3Q91XZ7 Gm7514-201ENSMUST00000209475 934 ntBASIC17.47■□□□□ 0.39
Pcdhb3Q91XZ7 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.47■□□□□ 0.39
Pcdhb3Q91XZ7 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb3Q91XZ7 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb3Q91XZ7 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17.47■□□□□ 0.39
Pcdhb3Q91XZ7 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb3Q91XZ7 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb3Q91XZ7 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb3Q91XZ7 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb3Q91XZ7 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.47■□□□□ 0.39
Pcdhb3Q91XZ7 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb3Q91XZ7 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb3Q91XZ7 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Pcdhb3Q91XZ7 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb3Q91XZ7 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb3Q91XZ7 AC069562.2-201ENSMUST00000224644 2146 ntBASIC17.47■□□□□ 0.39
Pcdhb3Q91XZ7 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb3Q91XZ7 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Pcdhb3Q91XZ7 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb3Q91XZ7 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Pcdhb3Q91XZ7 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb3Q91XZ7 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Pcdhb3Q91XZ7 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb3Q91XZ7 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb3Q91XZ7 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb3Q91XZ7 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb3Q91XZ7 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms