Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Pcdhga9Q91XX9 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.36■□□□□ 0.37
Pcdhga9Q91XX9 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhga9Q91XX9 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhga9Q91XX9 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhga9Q91XX9 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhga9Q91XX9 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhga9Q91XX9 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.36■□□□□ 0.37
Pcdhga9Q91XX9 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Pcdhga9Q91XX9 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhga9Q91XX9 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhga9Q91XX9 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhga9Q91XX9 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhga9Q91XX9 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.35■□□□□ 0.37
Pcdhga9Q91XX9 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhga9Q91XX9 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhga9Q91XX9 Gm13836-201ENSMUST00000121159 501 ntBASIC17.35■□□□□ 0.37
Pcdhga9Q91XX9 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.35■□□□□ 0.37
Pcdhga9Q91XX9 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhga9Q91XX9 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhga9Q91XX9 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhga9Q91XX9 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhga9Q91XX9 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhga9Q91XX9 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhga9Q91XX9 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhga9Q91XX9 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhga9Q91XX9 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhga9Q91XX9 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhga9Q91XX9 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhga9Q91XX9 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhga9Q91XX9 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhga9Q91XX9 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhga9Q91XX9 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhga9Q91XX9 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.34■□□□□ 0.37
Pcdhga9Q91XX9 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.34■□□□□ 0.37
Pcdhga9Q91XX9 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhga9Q91XX9 Gm42545-201ENSMUST00000202755 922 ntBASIC17.34■□□□□ 0.37
Pcdhga9Q91XX9 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
Pcdhga9Q91XX9 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.34■□□□□ 0.37
Pcdhga9Q91XX9 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.34■□□□□ 0.37
Pcdhga9Q91XX9 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Pcdhga9Q91XX9 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhga9Q91XX9 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
Pcdhga9Q91XX9 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.34■□□□□ 0.37
Pcdhga9Q91XX9 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdhga9Q91XX9 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdhga9Q91XX9 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdhga9Q91XX9 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Pcdhga9Q91XX9 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdhga9Q91XX9 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdhga9Q91XX9 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdhga9Q91XX9 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdhga9Q91XX9 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.33■□□□□ 0.37
Pcdhga9Q91XX9 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdhga9Q91XX9 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhga9Q91XX9 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.33■□□□□ 0.36
Pcdhga9Q91XX9 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhga9Q91XX9 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Pcdhga9Q91XX9 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhga9Q91XX9 Gm8969-201ENSMUST00000199694 526 ntBASIC17.33■□□□□ 0.36
Pcdhga9Q91XX9 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhga9Q91XX9 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhga9Q91XX9 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Pcdhga9Q91XX9 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Pcdhga9Q91XX9 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhga9Q91XX9 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhga9Q91XX9 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.33■□□□□ 0.36
Pcdhga9Q91XX9 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhga9Q91XX9 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhga9Q91XX9 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhga9Q91XX9 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhga9Q91XX9 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.32■□□□□ 0.36
Pcdhga9Q91XX9 Gm37055-201ENSMUST00000191866 133 ntBASIC17.32■□□□□ 0.36
Pcdhga9Q91XX9 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.32■□□□□ 0.36
Pcdhga9Q91XX9 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhga9Q91XX9 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhga9Q91XX9 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhga9Q91XX9 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhga9Q91XX9 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhga9Q91XX9 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.32■□□□□ 0.36
Pcdhga9Q91XX9 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.32■□□□□ 0.36
Pcdhga9Q91XX9 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhga9Q91XX9 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhga9Q91XX9 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhga9Q91XX9 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhga9Q91XX9 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhga9Q91XX9 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.31■□□□□ 0.36
Pcdhga9Q91XX9 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhga9Q91XX9 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhga9Q91XX9 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhga9Q91XX9 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Pcdhga9Q91XX9 Gm7977-201ENSMUST00000193787 748 ntBASIC17.31■□□□□ 0.36
Pcdhga9Q91XX9 AC135963.1-201ENSMUST00000211640 717 ntBASIC17.31■□□□□ 0.36
Pcdhga9Q91XX9 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhga9Q91XX9 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Pcdhga9Q91XX9 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhga9Q91XX9 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Pcdhga9Q91XX9 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhga9Q91XX9 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.31■□□□□ 0.36
Pcdhga9Q91XX9 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms