Protein–RNA interactions for Protein: Q91XX6

Pcdhgb4, Protocadherin gamma B4, mousemouse

Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb4Q91XX6 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhgb4Q91XX6 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhgb4Q91XX6 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
Pcdhgb4Q91XX6 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhgb4Q91XX6 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Pcdhgb4Q91XX6 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhgb4Q91XX6 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Pcdhgb4Q91XX6 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhgb4Q91XX6 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhgb4Q91XX6 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhgb4Q91XX6 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Pcdhgb4Q91XX6 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhgb4Q91XX6 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhgb4Q91XX6 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhgb4Q91XX6 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhgb4Q91XX6 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhgb4Q91XX6 Gm13401-201ENSMUST00000117074 291 ntBASIC18.55■□□□□ 0.56
Pcdhgb4Q91XX6 Gm27275-201ENSMUST00000184318 272 ntBASIC18.55■□□□□ 0.56
Pcdhgb4Q91XX6 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhgb4Q91XX6 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.55■□□□□ 0.56
Pcdhgb4Q91XX6 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhgb4Q91XX6 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhgb4Q91XX6 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhgb4Q91XX6 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Pcdhgb4Q91XX6 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Pcdhgb4Q91XX6 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhgb4Q91XX6 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhgb4Q91XX6 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Pcdhgb4Q91XX6 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Pcdhgb4Q91XX6 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.54■□□□□ 0.56
Pcdhgb4Q91XX6 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhgb4Q91XX6 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhgb4Q91XX6 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhgb4Q91XX6 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhgb4Q91XX6 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.54■□□□□ 0.56
Pcdhgb4Q91XX6 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.54■□□□□ 0.56
Pcdhgb4Q91XX6 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhgb4Q91XX6 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
Pcdhgb4Q91XX6 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhgb4Q91XX6 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Pcdhgb4Q91XX6 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhgb4Q91XX6 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhgb4Q91XX6 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Pcdhgb4Q91XX6 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhgb4Q91XX6 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhgb4Q91XX6 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhgb4Q91XX6 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhgb4Q91XX6 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.53■□□□□ 0.56
Pcdhgb4Q91XX6 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhgb4Q91XX6 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhgb4Q91XX6 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhgb4Q91XX6 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhgb4Q91XX6 AC125311.2-201ENSMUST00000227477 1940 ntBASIC18.53■□□□□ 0.56
Pcdhgb4Q91XX6 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhgb4Q91XX6 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC18.53■□□□□ 0.56
Pcdhgb4Q91XX6 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.53■□□□□ 0.56
Pcdhgb4Q91XX6 AC163280.1-201ENSMUST00000228194 1100 ntBASIC18.53■□□□□ 0.56
Pcdhgb4Q91XX6 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhgb4Q91XX6 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Pcdhgb4Q91XX6 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhgb4Q91XX6 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhgb4Q91XX6 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhgb4Q91XX6 Gm43338-201ENSMUST00000198617 2223 ntBASIC18.53■□□□□ 0.56
Pcdhgb4Q91XX6 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhgb4Q91XX6 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhgb4Q91XX6 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Pcdhgb4Q91XX6 AC121598.2-201ENSMUST00000228376 2325 ntBASIC18.52■□□□□ 0.56
Pcdhgb4Q91XX6 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhgb4Q91XX6 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.52■□□□□ 0.56
Pcdhgb4Q91XX6 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.52■□□□□ 0.56
Pcdhgb4Q91XX6 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhgb4Q91XX6 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhgb4Q91XX6 Gm5898-201ENSMUST00000121016 2071 ntBASIC18.52■□□□□ 0.56
Pcdhgb4Q91XX6 Gm43808-201ENSMUST00000202534 2065 ntBASIC18.52■□□□□ 0.56
Pcdhgb4Q91XX6 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhgb4Q91XX6 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Pcdhgb4Q91XX6 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhgb4Q91XX6 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Pcdhgb4Q91XX6 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhgb4Q91XX6 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhgb4Q91XX6 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC18.51■□□□□ 0.55
Pcdhgb4Q91XX6 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhgb4Q91XX6 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhgb4Q91XX6 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC18.51■□□□□ 0.55
Pcdhgb4Q91XX6 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhgb4Q91XX6 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC18.51■□□□□ 0.55
Pcdhgb4Q91XX6 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhgb4Q91XX6 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhgb4Q91XX6 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC18.51■□□□□ 0.55
Pcdhgb4Q91XX6 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhgb4Q91XX6 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhgb4Q91XX6 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhgb4Q91XX6 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhgb4Q91XX6 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
Pcdhgb4Q91XX6 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.5■□□□□ 0.55
Pcdhgb4Q91XX6 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhgb4Q91XX6 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhgb4Q91XX6 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Pcdhgb4Q91XX6 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhgb4Q91XX6 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms