Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC20.12■□□□□ 0.81
Trex1Q91XB0 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Trex1Q91XB0 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC20.12■□□□□ 0.81
Trex1Q91XB0 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trex1Q91XB0 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Trex1Q91XB0 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC20.12■□□□□ 0.81
Trex1Q91XB0 Mir1668-201ENSMUST00000184114 107 ntBASIC20.12■□□□□ 0.81
Trex1Q91XB0 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trex1Q91XB0 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trex1Q91XB0 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trex1Q91XB0 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trex1Q91XB0 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trex1Q91XB0 Gm8258-201ENSMUST00000055593 1449 ntBASIC20.11■□□□□ 0.81
Trex1Q91XB0 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Trex1Q91XB0 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trex1Q91XB0 Iqck-206ENSMUST00000208658 2891 ntBASIC20.11■□□□□ 0.81
Trex1Q91XB0 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Trex1Q91XB0 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC20.11■□□□□ 0.81
Trex1Q91XB0 Gm25016-201ENSMUST00000158399 131 ntBASIC20.11■□□□□ 0.81
Trex1Q91XB0 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC20.11■□□□□ 0.81
Trex1Q91XB0 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trex1Q91XB0 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trex1Q91XB0 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC20.11■□□□□ 0.81
Trex1Q91XB0 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Trex1Q91XB0 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trex1Q91XB0 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trex1Q91XB0 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trex1Q91XB0 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Trex1Q91XB0 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trex1Q91XB0 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trex1Q91XB0 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trex1Q91XB0 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trex1Q91XB0 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trex1Q91XB0 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trex1Q91XB0 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Trex1Q91XB0 Gm27389-201ENSMUST00000183622 195 ntBASIC20.1■□□□□ 0.81
Trex1Q91XB0 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Trex1Q91XB0 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
Trex1Q91XB0 Gm7213-201ENSMUST00000215977 950 ntBASIC20.1■□□□□ 0.81
Trex1Q91XB0 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trex1Q91XB0 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Trex1Q91XB0 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trex1Q91XB0 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Trex1Q91XB0 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC20.09■□□□□ 0.81
Trex1Q91XB0 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trex1Q91XB0 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC20.09■□□□□ 0.81
Trex1Q91XB0 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trex1Q91XB0 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trex1Q91XB0 Gm17661-201ENSMUST00000170317 270 ntBASIC20.09■□□□□ 0.81
Trex1Q91XB0 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Trex1Q91XB0 AC154471.1-201ENSMUST00000224418 436 ntBASIC20.09■□□□□ 0.81
Trex1Q91XB0 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Trex1Q91XB0 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Trex1Q91XB0 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC20.09■□□□□ 0.81
Trex1Q91XB0 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Trex1Q91XB0 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Trex1Q91XB0 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trex1Q91XB0 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trex1Q91XB0 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trex1Q91XB0 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Trex1Q91XB0 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Trex1Q91XB0 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trex1Q91XB0 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC20.08■□□□□ 0.81
Trex1Q91XB0 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC20.08■□□□□ 0.81
Trex1Q91XB0 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC20.08■□□□□ 0.81
Trex1Q91XB0 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Trex1Q91XB0 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trex1Q91XB0 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trex1Q91XB0 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trex1Q91XB0 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
Trex1Q91XB0 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trex1Q91XB0 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
Trex1Q91XB0 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trex1Q91XB0 Gm45141-201ENSMUST00000206502 1888 ntBASIC20.07■□□□□ 0.8
Trex1Q91XB0 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Trex1Q91XB0 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trex1Q91XB0 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trex1Q91XB0 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trex1Q91XB0 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trex1Q91XB0 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC20.07■□□□□ 0.8
Trex1Q91XB0 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Trex1Q91XB0 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trex1Q91XB0 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trex1Q91XB0 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trex1Q91XB0 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trex1Q91XB0 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trex1Q91XB0 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
Trex1Q91XB0 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trex1Q91XB0 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trex1Q91XB0 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trex1Q91XB0 Gm14859-201ENSMUST00000117752 357 ntBASIC20.06■□□□□ 0.8
Trex1Q91XB0 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC20.06■□□□□ 0.8
Trex1Q91XB0 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC20.06■□□□□ 0.8
Trex1Q91XB0 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Trex1Q91XB0 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trex1Q91XB0 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Trex1Q91XB0 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Trex1Q91XB0 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trex1Q91XB0 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Trex1Q91XB0 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms