Protein–RNA interactions for Protein: Q91VR5

Ddx1, ATP-dependent RNA helicase DDX1, mousemouse

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx1Q91VR5 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ddx1Q91VR5 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ddx1Q91VR5 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ddx1Q91VR5 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Ddx1Q91VR5 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Ddx1Q91VR5 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx1Q91VR5 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Ddx1Q91VR5 Gm13401-201ENSMUST00000117074 291 ntBASIC18.11■□□□□ 0.49
Ddx1Q91VR5 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.11■□□□□ 0.49
Ddx1Q91VR5 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx1Q91VR5 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx1Q91VR5 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx1Q91VR5 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx1Q91VR5 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx1Q91VR5 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx1Q91VR5 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx1Q91VR5 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx1Q91VR5 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx1Q91VR5 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx1Q91VR5 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.1■□□□□ 0.49
Ddx1Q91VR5 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx1Q91VR5 Gm45560-201ENSMUST00000211492 1472 ntBASIC18.1■□□□□ 0.49
Ddx1Q91VR5 Gm10418-201ENSMUST00000100943 576 ntBASIC18.1■□□□□ 0.49
Ddx1Q91VR5 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.1■□□□□ 0.49
Ddx1Q91VR5 Gm15375-201ENSMUST00000119510 849 ntBASIC18.1■□□□□ 0.49
Ddx1Q91VR5 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx1Q91VR5 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx1Q91VR5 Gm5417-201ENSMUST00000079706 384 ntBASIC18.1■□□□□ 0.49
Ddx1Q91VR5 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx1Q91VR5 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx1Q91VR5 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx1Q91VR5 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx1Q91VR5 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx1Q91VR5 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC18.09■□□□□ 0.49
Ddx1Q91VR5 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.09■□□□□ 0.49
Ddx1Q91VR5 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx1Q91VR5 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.09■□□□□ 0.49
Ddx1Q91VR5 Gm10459-201ENSMUST00000202708 1155 ntBASIC18.09■□□□□ 0.49
Ddx1Q91VR5 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC18.09■□□□□ 0.49
Ddx1Q91VR5 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx1Q91VR5 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx1Q91VR5 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx1Q91VR5 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx1Q91VR5 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Ddx1Q91VR5 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ddx1Q91VR5 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ddx1Q91VR5 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Ddx1Q91VR5 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ddx1Q91VR5 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ddx1Q91VR5 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ddx1Q91VR5 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ddx1Q91VR5 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ddx1Q91VR5 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
Ddx1Q91VR5 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ddx1Q91VR5 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ddx1Q91VR5 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ddx1Q91VR5 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ddx1Q91VR5 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ddx1Q91VR5 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.08■□□□□ 0.48
Ddx1Q91VR5 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.08■□□□□ 0.48
Ddx1Q91VR5 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ddx1Q91VR5 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ddx1Q91VR5 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ddx1Q91VR5 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ddx1Q91VR5 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC18.07■□□□□ 0.48
Ddx1Q91VR5 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ddx1Q91VR5 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ddx1Q91VR5 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ddx1Q91VR5 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ddx1Q91VR5 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ddx1Q91VR5 Gm6728-201ENSMUST00000178117 1065 ntBASIC18.06■□□□□ 0.48
Ddx1Q91VR5 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC18.06■□□□□ 0.48
Ddx1Q91VR5 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC18.06■□□□□ 0.48
Ddx1Q91VR5 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC18.06■□□□□ 0.48
Ddx1Q91VR5 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Ddx1Q91VR5 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ddx1Q91VR5 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC18.06■□□□□ 0.48
Ddx1Q91VR5 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
Ddx1Q91VR5 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ddx1Q91VR5 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ddx1Q91VR5 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ddx1Q91VR5 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ddx1Q91VR5 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ddx1Q91VR5 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ddx1Q91VR5 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ddx1Q91VR5 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
Ddx1Q91VR5 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ddx1Q91VR5 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ddx1Q91VR5 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ddx1Q91VR5 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC18.05■□□□□ 0.48
Ddx1Q91VR5 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Ddx1Q91VR5 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ddx1Q91VR5 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ddx1Q91VR5 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ddx1Q91VR5 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ddx1Q91VR5 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ddx1Q91VR5 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ddx1Q91VR5 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ddx1Q91VR5 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ddx1Q91VR5 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms