Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vsx1Q91V10 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Vsx1Q91V10 Gm5867-201ENSMUST00000063197 592 ntBASIC17.32■□□□□ 0.36
Vsx1Q91V10 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vsx1Q91V10 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Vsx1Q91V10 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vsx1Q91V10 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vsx1Q91V10 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Vsx1Q91V10 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vsx1Q91V10 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vsx1Q91V10 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vsx1Q91V10 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vsx1Q91V10 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Vsx1Q91V10 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vsx1Q91V10 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Vsx1Q91V10 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Vsx1Q91V10 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Vsx1Q91V10 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vsx1Q91V10 Rarb-207ENSMUST00000225921 2756 ntBASIC17.31■□□□□ 0.36
Vsx1Q91V10 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vsx1Q91V10 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Vsx1Q91V10 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vsx1Q91V10 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vsx1Q91V10 Gm17808-201ENSMUST00000200859 894 ntBASIC17.31■□□□□ 0.36
Vsx1Q91V10 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC17.31■□□□□ 0.36
Vsx1Q91V10 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vsx1Q91V10 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vsx1Q91V10 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vsx1Q91V10 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vsx1Q91V10 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.31■□□□□ 0.36
Vsx1Q91V10 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Vsx1Q91V10 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vsx1Q91V10 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vsx1Q91V10 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.31■□□□□ 0.36
Vsx1Q91V10 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vsx1Q91V10 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vsx1Q91V10 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vsx1Q91V10 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vsx1Q91V10 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vsx1Q91V10 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Vsx1Q91V10 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vsx1Q91V10 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Vsx1Q91V10 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.3■□□□□ 0.36
Vsx1Q91V10 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vsx1Q91V10 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vsx1Q91V10 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vsx1Q91V10 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vsx1Q91V10 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Vsx1Q91V10 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.3■□□□□ 0.36
Vsx1Q91V10 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vsx1Q91V10 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vsx1Q91V10 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Vsx1Q91V10 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Vsx1Q91V10 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vsx1Q91V10 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Vsx1Q91V10 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vsx1Q91V10 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Vsx1Q91V10 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vsx1Q91V10 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.29■□□□□ 0.36
Vsx1Q91V10 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Vsx1Q91V10 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Vsx1Q91V10 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Vsx1Q91V10 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vsx1Q91V10 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Vsx1Q91V10 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vsx1Q91V10 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vsx1Q91V10 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vsx1Q91V10 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vsx1Q91V10 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vsx1Q91V10 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vsx1Q91V10 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vsx1Q91V10 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Vsx1Q91V10 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vsx1Q91V10 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Vsx1Q91V10 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vsx1Q91V10 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.29■□□□□ 0.36
Vsx1Q91V10 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vsx1Q91V10 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vsx1Q91V10 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vsx1Q91V10 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vsx1Q91V10 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Vsx1Q91V10 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Vsx1Q91V10 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Vsx1Q91V10 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Vsx1Q91V10 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC17.28■□□□□ 0.36
Vsx1Q91V10 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vsx1Q91V10 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC17.28■□□□□ 0.36
Vsx1Q91V10 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC17.28■□□□□ 0.36
Vsx1Q91V10 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Vsx1Q91V10 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.28■□□□□ 0.36
Vsx1Q91V10 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vsx1Q91V10 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vsx1Q91V10 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Vsx1Q91V10 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.28■□□□□ 0.36
Vsx1Q91V10 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.28■□□□□ 0.36
Vsx1Q91V10 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vsx1Q91V10 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vsx1Q91V10 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vsx1Q91V10 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vsx1Q91V10 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 11.8 ms