Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh18Q8VHR0 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh18Q8VHR0 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Pcdh18Q8VHR0 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Pcdh18Q8VHR0 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh18Q8VHR0 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh18Q8VHR0 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
Pcdh18Q8VHR0 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh18Q8VHR0 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh18Q8VHR0 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdh18Q8VHR0 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdh18Q8VHR0 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdh18Q8VHR0 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Pcdh18Q8VHR0 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdh18Q8VHR0 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdh18Q8VHR0 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdh18Q8VHR0 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdh18Q8VHR0 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdh18Q8VHR0 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdh18Q8VHR0 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdh18Q8VHR0 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdh18Q8VHR0 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdh18Q8VHR0 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdh18Q8VHR0 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh18Q8VHR0 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh18Q8VHR0 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh18Q8VHR0 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh18Q8VHR0 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh18Q8VHR0 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh18Q8VHR0 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh18Q8VHR0 AC099934.2-201ENSMUST00000196389 70 ntBASIC16.9■□□□□ 0.3
Pcdh18Q8VHR0 AC156953.1-201ENSMUST00000196953 70 ntBASIC16.9■□□□□ 0.3
Pcdh18Q8VHR0 AC157822.2-201ENSMUST00000200291 70 ntBASIC16.9■□□□□ 0.3
Pcdh18Q8VHR0 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC16.9■□□□□ 0.3
Pcdh18Q8VHR0 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh18Q8VHR0 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh18Q8VHR0 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Pcdh18Q8VHR0 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh18Q8VHR0 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh18Q8VHR0 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh18Q8VHR0 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Pcdh18Q8VHR0 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Pcdh18Q8VHR0 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Pcdh18Q8VHR0 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.89■□□□□ 0.29
Pcdh18Q8VHR0 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdh18Q8VHR0 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdh18Q8VHR0 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdh18Q8VHR0 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdh18Q8VHR0 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC16.89■□□□□ 0.29
Pcdh18Q8VHR0 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdh18Q8VHR0 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdh18Q8VHR0 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.29
Pcdh18Q8VHR0 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdh18Q8VHR0 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.89■□□□□ 0.29
Pcdh18Q8VHR0 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdh18Q8VHR0 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdh18Q8VHR0 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdh18Q8VHR0 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdh18Q8VHR0 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdh18Q8VHR0 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdh18Q8VHR0 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC16.88■□□□□ 0.29
Pcdh18Q8VHR0 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdh18Q8VHR0 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC16.88■□□□□ 0.29
Pcdh18Q8VHR0 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Pcdh18Q8VHR0 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdh18Q8VHR0 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdh18Q8VHR0 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdh18Q8VHR0 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdh18Q8VHR0 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Pcdh18Q8VHR0 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdh18Q8VHR0 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdh18Q8VHR0 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdh18Q8VHR0 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdh18Q8VHR0 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdh18Q8VHR0 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdh18Q8VHR0 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdh18Q8VHR0 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdh18Q8VHR0 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdh18Q8VHR0 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdh18Q8VHR0 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdh18Q8VHR0 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdh18Q8VHR0 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdh18Q8VHR0 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdh18Q8VHR0 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdh18Q8VHR0 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdh18Q8VHR0 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdh18Q8VHR0 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh18Q8VHR0 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh18Q8VHR0 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh18Q8VHR0 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh18Q8VHR0 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh18Q8VHR0 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh18Q8VHR0 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh18Q8VHR0 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh18Q8VHR0 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh18Q8VHR0 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
Pcdh18Q8VHR0 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
Pcdh18Q8VHR0 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh18Q8VHR0 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh18Q8VHR0 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms