Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rpa1Q8VEE4 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rpa1Q8VEE4 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.68■□□□□ 0.42
Rpa1Q8VEE4 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rpa1Q8VEE4 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Rpa1Q8VEE4 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Rpa1Q8VEE4 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Rpa1Q8VEE4 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rpa1Q8VEE4 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rpa1Q8VEE4 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.67■□□□□ 0.42
Rpa1Q8VEE4 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC17.67■□□□□ 0.42
Rpa1Q8VEE4 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rpa1Q8VEE4 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.67■□□□□ 0.42
Rpa1Q8VEE4 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rpa1Q8VEE4 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rpa1Q8VEE4 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Rpa1Q8VEE4 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rpa1Q8VEE4 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Rpa1Q8VEE4 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rpa1Q8VEE4 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Rpa1Q8VEE4 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Rpa1Q8VEE4 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rpa1Q8VEE4 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Rpa1Q8VEE4 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rpa1Q8VEE4 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
Rpa1Q8VEE4 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rpa1Q8VEE4 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Rpa1Q8VEE4 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rpa1Q8VEE4 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rpa1Q8VEE4 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC17.66■□□□□ 0.42
Rpa1Q8VEE4 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rpa1Q8VEE4 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rpa1Q8VEE4 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rpa1Q8VEE4 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rpa1Q8VEE4 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.66■□□□□ 0.42
Rpa1Q8VEE4 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rpa1Q8VEE4 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rpa1Q8VEE4 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rpa1Q8VEE4 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rpa1Q8VEE4 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rpa1Q8VEE4 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rpa1Q8VEE4 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rpa1Q8VEE4 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.65■□□□□ 0.42
Rpa1Q8VEE4 Gm13146-201ENSMUST00000118508 780 ntBASIC17.65■□□□□ 0.42
Rpa1Q8VEE4 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.65■□□□□ 0.42
Rpa1Q8VEE4 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Rpa1Q8VEE4 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Rpa1Q8VEE4 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rpa1Q8VEE4 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC17.65■□□□□ 0.42
Rpa1Q8VEE4 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rpa1Q8VEE4 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Rpa1Q8VEE4 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Rpa1Q8VEE4 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Rpa1Q8VEE4 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rpa1Q8VEE4 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rpa1Q8VEE4 Gm13534-201ENSMUST00000121169 513 ntBASIC17.64■□□□□ 0.41
Rpa1Q8VEE4 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.64■□□□□ 0.41
Rpa1Q8VEE4 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC17.64■□□□□ 0.41
Rpa1Q8VEE4 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC17.64■□□□□ 0.41
Rpa1Q8VEE4 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rpa1Q8VEE4 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rpa1Q8VEE4 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.64■□□□□ 0.41
Rpa1Q8VEE4 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Rpa1Q8VEE4 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rpa1Q8VEE4 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Rpa1Q8VEE4 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Rpa1Q8VEE4 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rpa1Q8VEE4 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rpa1Q8VEE4 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.64■□□□□ 0.41
Rpa1Q8VEE4 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Rpa1Q8VEE4 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rpa1Q8VEE4 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rpa1Q8VEE4 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Rpa1Q8VEE4 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rpa1Q8VEE4 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rpa1Q8VEE4 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rpa1Q8VEE4 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rpa1Q8VEE4 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.63■□□□□ 0.41
Rpa1Q8VEE4 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rpa1Q8VEE4 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rpa1Q8VEE4 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
Rpa1Q8VEE4 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Rpa1Q8VEE4 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rpa1Q8VEE4 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rpa1Q8VEE4 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rpa1Q8VEE4 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
Rpa1Q8VEE4 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rpa1Q8VEE4 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
Rpa1Q8VEE4 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
Rpa1Q8VEE4 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC17.63■□□□□ 0.41
Rpa1Q8VEE4 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Rpa1Q8VEE4 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rpa1Q8VEE4 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rpa1Q8VEE4 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rpa1Q8VEE4 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rpa1Q8VEE4 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rpa1Q8VEE4 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rpa1Q8VEE4 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rpa1Q8VEE4 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rpa1Q8VEE4 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms