Protein–RNA interactions for Protein: Q8VE18

Smg8, Protein SMG8, mousemouse

Predictions only

Length 991 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg8Q8VE18 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Smg8Q8VE18 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smg8Q8VE18 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smg8Q8VE18 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smg8Q8VE18 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smg8Q8VE18 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smg8Q8VE18 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
Smg8Q8VE18 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Smg8Q8VE18 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Smg8Q8VE18 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC18.69■□□□□ 0.58
Smg8Q8VE18 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Smg8Q8VE18 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smg8Q8VE18 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smg8Q8VE18 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smg8Q8VE18 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Smg8Q8VE18 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smg8Q8VE18 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Smg8Q8VE18 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smg8Q8VE18 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smg8Q8VE18 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Smg8Q8VE18 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC18.68■□□□□ 0.58
Smg8Q8VE18 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC18.68■□□□□ 0.58
Smg8Q8VE18 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC18.68■□□□□ 0.58
Smg8Q8VE18 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC18.68■□□□□ 0.58
Smg8Q8VE18 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Smg8Q8VE18 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smg8Q8VE18 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.68■□□□□ 0.58
Smg8Q8VE18 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smg8Q8VE18 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smg8Q8VE18 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Smg8Q8VE18 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Smg8Q8VE18 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smg8Q8VE18 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smg8Q8VE18 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Smg8Q8VE18 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smg8Q8VE18 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Smg8Q8VE18 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smg8Q8VE18 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Smg8Q8VE18 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smg8Q8VE18 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Smg8Q8VE18 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smg8Q8VE18 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Smg8Q8VE18 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Smg8Q8VE18 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Smg8Q8VE18 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC18.66■□□□□ 0.58
Smg8Q8VE18 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Smg8Q8VE18 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC18.66■□□□□ 0.58
Smg8Q8VE18 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smg8Q8VE18 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
Smg8Q8VE18 Gm9731-201ENSMUST00000209480 747 ntBASIC18.66■□□□□ 0.58
Smg8Q8VE18 Gm7370-201ENSMUST00000219471 767 ntBASIC18.66■□□□□ 0.58
Smg8Q8VE18 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smg8Q8VE18 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smg8Q8VE18 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Smg8Q8VE18 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smg8Q8VE18 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Smg8Q8VE18 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smg8Q8VE18 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Smg8Q8VE18 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC18.65■□□□□ 0.58
Smg8Q8VE18 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Smg8Q8VE18 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smg8Q8VE18 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smg8Q8VE18 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Smg8Q8VE18 Gm10013-201ENSMUST00000106074 672 ntBASIC18.65■□□□□ 0.58
Smg8Q8VE18 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Smg8Q8VE18 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smg8Q8VE18 Gm16061-201ENSMUST00000122167 857 ntBASIC18.65■□□□□ 0.58
Smg8Q8VE18 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC18.65■□□□□ 0.58
Smg8Q8VE18 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smg8Q8VE18 Mir8112-201ENSMUST00000184382 131 ntBASIC18.65■□□□□ 0.58
Smg8Q8VE18 Gm37025-201ENSMUST00000195159 829 ntBASIC18.65■□□□□ 0.58
Smg8Q8VE18 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC18.65■□□□□ 0.58
Smg8Q8VE18 Il3ra-202ENSMUST00000223589 738 ntBASIC18.65■□□□□ 0.58
Smg8Q8VE18 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smg8Q8VE18 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smg8Q8VE18 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smg8Q8VE18 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smg8Q8VE18 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC18.65■□□□□ 0.58
Smg8Q8VE18 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Smg8Q8VE18 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Smg8Q8VE18 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smg8Q8VE18 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smg8Q8VE18 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smg8Q8VE18 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
Smg8Q8VE18 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Smg8Q8VE18 Gm23634-201ENSMUST00000175071 91 ntBASIC18.64■□□□□ 0.57
Smg8Q8VE18 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC18.64■□□□□ 0.57
Smg8Q8VE18 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC18.64■□□□□ 0.57
Smg8Q8VE18 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Smg8Q8VE18 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smg8Q8VE18 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
Smg8Q8VE18 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Smg8Q8VE18 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smg8Q8VE18 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smg8Q8VE18 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Smg8Q8VE18 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.64■□□□□ 0.57
Smg8Q8VE18 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smg8Q8VE18 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Smg8Q8VE18 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Smg8Q8VE18 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms