Protein–RNA interactions for Protein: Q8VDP2

UPF0428 protein CXorf56 homolog, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8VDP2 AC153526.5-201ENSMUST00000218661 2147 ntBASIC17.14■□□□□ 0.33
Q8VDP2 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Q8VDP2 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Q8VDP2 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Q8VDP2 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Q8VDP2 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Q8VDP2 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Q8VDP2 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Q8VDP2 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Q8VDP2 AC133083.1-201ENSMUST00000221736 2209 ntBASIC17.13■□□□□ 0.33
Q8VDP2 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Q8VDP2 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Q8VDP2 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Q8VDP2 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Q8VDP2 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Q8VDP2 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Q8VDP2 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Q8VDP2 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Q8VDP2 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Q8VDP2 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Q8VDP2 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Q8VDP2 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Q8VDP2 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Q8VDP2 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Q8VDP2 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Q8VDP2 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Q8VDP2 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Q8VDP2 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Q8VDP2 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Q8VDP2 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Q8VDP2 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Q8VDP2 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Q8VDP2 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Q8VDP2 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC17.12■□□□□ 0.33
Q8VDP2 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Q8VDP2 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Q8VDP2 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Q8VDP2 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Q8VDP2 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Q8VDP2 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Q8VDP2 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Q8VDP2 Gm43034-201ENSMUST00000198678 1364 ntBASIC17.12■□□□□ 0.33
Q8VDP2 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Q8VDP2 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Q8VDP2 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Q8VDP2 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Q8VDP2 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Q8VDP2 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Q8VDP2 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Q8VDP2 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Q8VDP2 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Q8VDP2 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Q8VDP2 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Q8VDP2 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Q8VDP2 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Q8VDP2 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC17.11■□□□□ 0.33
Q8VDP2 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Q8VDP2 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Q8VDP2 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Q8VDP2 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Q8VDP2 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Q8VDP2 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Q8VDP2 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Q8VDP2 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Q8VDP2 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Q8VDP2 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Q8VDP2 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Q8VDP2 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Q8VDP2 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Q8VDP2 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Q8VDP2 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Q8VDP2 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Q8VDP2 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Q8VDP2 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Q8VDP2 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Q8VDP2 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Q8VDP2 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Q8VDP2 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Q8VDP2 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Q8VDP2 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Q8VDP2 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC17.1■□□□□ 0.33
Q8VDP2 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Q8VDP2 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC17.1■□□□□ 0.33
Q8VDP2 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Q8VDP2 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Q8VDP2 Prob1-201ENSMUST00000097619 3021 ntBASIC17.1■□□□□ 0.33
Q8VDP2 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.1■□□□□ 0.33
Q8VDP2 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Q8VDP2 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Q8VDP2 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Q8VDP2 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Q8VDP2 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Q8VDP2 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC17.09■□□□□ 0.33
Q8VDP2 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Q8VDP2 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Q8VDP2 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Q8VDP2 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Q8VDP2 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Q8VDP2 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Q8VDP2 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms