Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ndc1Q8VCB1 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ndc1Q8VCB1 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ndc1Q8VCB1 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ndc1Q8VCB1 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC16.56■□□□□ 0.24
Ndc1Q8VCB1 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ndc1Q8VCB1 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ndc1Q8VCB1 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ndc1Q8VCB1 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC16.55■□□□□ 0.24
Ndc1Q8VCB1 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Ndc1Q8VCB1 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ndc1Q8VCB1 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ndc1Q8VCB1 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC16.55■□□□□ 0.24
Ndc1Q8VCB1 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ndc1Q8VCB1 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ndc1Q8VCB1 Gm21814-202ENSMUST00000203277 873 ntBASIC16.55■□□□□ 0.24
Ndc1Q8VCB1 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC16.55■□□□□ 0.24
Ndc1Q8VCB1 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC16.55■□□□□ 0.24
Ndc1Q8VCB1 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ndc1Q8VCB1 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ndc1Q8VCB1 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ndc1Q8VCB1 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.55■□□□□ 0.24
Ndc1Q8VCB1 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Ndc1Q8VCB1 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.55■□□□□ 0.24
Ndc1Q8VCB1 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ndc1Q8VCB1 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ndc1Q8VCB1 Gm43213-201ENSMUST00000151866 1790 ntBASIC16.54■□□□□ 0.24
Ndc1Q8VCB1 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ndc1Q8VCB1 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ndc1Q8VCB1 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ndc1Q8VCB1 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ndc1Q8VCB1 Gm7977-201ENSMUST00000193787 748 ntBASIC16.54■□□□□ 0.24
Ndc1Q8VCB1 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ndc1Q8VCB1 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ndc1Q8VCB1 Timm23-208ENSMUST00000226683 750 ntBASIC16.54■□□□□ 0.24
Ndc1Q8VCB1 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ndc1Q8VCB1 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ndc1Q8VCB1 Gm9987-201ENSMUST00000069768 567 ntBASIC16.54■□□□□ 0.24
Ndc1Q8VCB1 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ndc1Q8VCB1 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Ndc1Q8VCB1 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Ndc1Q8VCB1 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ndc1Q8VCB1 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC16.54■□□□□ 0.24
Ndc1Q8VCB1 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ndc1Q8VCB1 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Ndc1Q8VCB1 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ndc1Q8VCB1 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Ndc1Q8VCB1 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ndc1Q8VCB1 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ndc1Q8VCB1 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ndc1Q8VCB1 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ndc1Q8VCB1 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Ndc1Q8VCB1 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Ndc1Q8VCB1 Gm43799-201ENSMUST00000201845 579 ntBASIC16.53■□□□□ 0.24
Ndc1Q8VCB1 Gm30025-201ENSMUST00000218555 728 ntBASIC16.53■□□□□ 0.24
Ndc1Q8VCB1 Otx2os1-204ENSMUST00000227221 751 ntBASIC16.53■□□□□ 0.24
Ndc1Q8VCB1 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ndc1Q8VCB1 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ndc1Q8VCB1 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Ndc1Q8VCB1 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Ndc1Q8VCB1 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Ndc1Q8VCB1 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ndc1Q8VCB1 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ndc1Q8VCB1 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ndc1Q8VCB1 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ndc1Q8VCB1 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ndc1Q8VCB1 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ndc1Q8VCB1 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ndc1Q8VCB1 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ndc1Q8VCB1 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Ndc1Q8VCB1 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ndc1Q8VCB1 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ndc1Q8VCB1 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Ndc1Q8VCB1 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ndc1Q8VCB1 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC16.52■□□□□ 0.24
Ndc1Q8VCB1 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ndc1Q8VCB1 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ndc1Q8VCB1 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Ndc1Q8VCB1 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ndc1Q8VCB1 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ndc1Q8VCB1 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Ndc1Q8VCB1 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ndc1Q8VCB1 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.52■□□□□ 0.23
Ndc1Q8VCB1 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ndc1Q8VCB1 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ndc1Q8VCB1 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ndc1Q8VCB1 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ndc1Q8VCB1 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ndc1Q8VCB1 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Ndc1Q8VCB1 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ndc1Q8VCB1 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ndc1Q8VCB1 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ndc1Q8VCB1 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ndc1Q8VCB1 Odf3b-204ENSMUST00000227834 930 ntBASIC16.51■□□□□ 0.23
Ndc1Q8VCB1 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ndc1Q8VCB1 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC16.51■□□□□ 0.23
Ndc1Q8VCB1 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ndc1Q8VCB1 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ndc1Q8VCB1 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ndc1Q8VCB1 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms