Protein–RNA interactions for Protein: Q8R550

Sh3kbp1, SH3 domain-containing kinase-binding protein 1, mousemouse

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1Q8R550 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sh3kbp1Q8R550 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sh3kbp1Q8R550 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sh3kbp1Q8R550 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.08■□□□□ 0.48
Sh3kbp1Q8R550 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sh3kbp1Q8R550 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sh3kbp1Q8R550 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Sh3kbp1Q8R550 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sh3kbp1Q8R550 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sh3kbp1Q8R550 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Sh3kbp1Q8R550 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sh3kbp1Q8R550 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sh3kbp1Q8R550 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sh3kbp1Q8R550 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Sh3kbp1Q8R550 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sh3kbp1Q8R550 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sh3kbp1Q8R550 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sh3kbp1Q8R550 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Sh3kbp1Q8R550 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Sh3kbp1Q8R550 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Sh3kbp1Q8R550 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Sh3kbp1Q8R550 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sh3kbp1Q8R550 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Sh3kbp1Q8R550 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Sh3kbp1Q8R550 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sh3kbp1Q8R550 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sh3kbp1Q8R550 Gm11643-201ENSMUST00000119578 864 ntBASIC18.06■□□□□ 0.48
Sh3kbp1Q8R550 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sh3kbp1Q8R550 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
Sh3kbp1Q8R550 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Sh3kbp1Q8R550 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC18.06■□□□□ 0.48
Sh3kbp1Q8R550 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC18.06■□□□□ 0.48
Sh3kbp1Q8R550 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sh3kbp1Q8R550 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sh3kbp1Q8R550 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sh3kbp1Q8R550 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sh3kbp1Q8R550 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sh3kbp1Q8R550 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sh3kbp1Q8R550 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
Sh3kbp1Q8R550 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.06■□□□□ 0.48
Sh3kbp1Q8R550 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sh3kbp1Q8R550 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sh3kbp1Q8R550 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sh3kbp1Q8R550 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sh3kbp1Q8R550 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Sh3kbp1Q8R550 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sh3kbp1Q8R550 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sh3kbp1Q8R550 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.05■□□□□ 0.48
Sh3kbp1Q8R550 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sh3kbp1Q8R550 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sh3kbp1Q8R550 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC18.05■□□□□ 0.48
Sh3kbp1Q8R550 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Sh3kbp1Q8R550 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC18.05■□□□□ 0.48
Sh3kbp1Q8R550 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sh3kbp1Q8R550 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sh3kbp1Q8R550 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Sh3kbp1Q8R550 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sh3kbp1Q8R550 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sh3kbp1Q8R550 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sh3kbp1Q8R550 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sh3kbp1Q8R550 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sh3kbp1Q8R550 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Sh3kbp1Q8R550 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Sh3kbp1Q8R550 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sh3kbp1Q8R550 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Sh3kbp1Q8R550 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sh3kbp1Q8R550 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sh3kbp1Q8R550 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sh3kbp1Q8R550 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sh3kbp1Q8R550 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.04■□□□□ 0.48
Sh3kbp1Q8R550 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Sh3kbp1Q8R550 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Sh3kbp1Q8R550 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
Sh3kbp1Q8R550 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.04■□□□□ 0.48
Sh3kbp1Q8R550 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Sh3kbp1Q8R550 Gm43799-201ENSMUST00000201845 579 ntBASIC18.04■□□□□ 0.48
Sh3kbp1Q8R550 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.04■□□□□ 0.48
Sh3kbp1Q8R550 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sh3kbp1Q8R550 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sh3kbp1Q8R550 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sh3kbp1Q8R550 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sh3kbp1Q8R550 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sh3kbp1Q8R550 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sh3kbp1Q8R550 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sh3kbp1Q8R550 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sh3kbp1Q8R550 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sh3kbp1Q8R550 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sh3kbp1Q8R550 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sh3kbp1Q8R550 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sh3kbp1Q8R550 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.03■□□□□ 0.48
Sh3kbp1Q8R550 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Sh3kbp1Q8R550 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sh3kbp1Q8R550 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Sh3kbp1Q8R550 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sh3kbp1Q8R550 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sh3kbp1Q8R550 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sh3kbp1Q8R550 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Sh3kbp1Q8R550 Gm37292-201ENSMUST00000192062 758 ntBASIC18.03■□□□□ 0.48
Sh3kbp1Q8R550 Gm16042-201ENSMUST00000204813 1247 ntBASIC18.03■□□□□ 0.48
Sh3kbp1Q8R550 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms