Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nup35Q8R4R6 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC14.34□□□□□ -0.11
Nup35Q8R4R6 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nup35Q8R4R6 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC14.34□□□□□ -0.11
Nup35Q8R4R6 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC14.34□□□□□ -0.11
Nup35Q8R4R6 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nup35Q8R4R6 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Nup35Q8R4R6 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Nup35Q8R4R6 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nup35Q8R4R6 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Nup35Q8R4R6 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nup35Q8R4R6 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Nup35Q8R4R6 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nup35Q8R4R6 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Nup35Q8R4R6 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nup35Q8R4R6 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nup35Q8R4R6 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
Nup35Q8R4R6 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nup35Q8R4R6 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nup35Q8R4R6 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nup35Q8R4R6 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nup35Q8R4R6 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC14.33□□□□□ -0.12
Nup35Q8R4R6 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nup35Q8R4R6 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nup35Q8R4R6 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nup35Q8R4R6 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nup35Q8R4R6 Gm13234-201ENSMUST00000120010 747 ntBASIC14.33□□□□□ -0.12
Nup35Q8R4R6 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nup35Q8R4R6 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nup35Q8R4R6 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nup35Q8R4R6 Gm28265-201ENSMUST00000188201 2319 ntBASIC14.33□□□□□ -0.12
Nup35Q8R4R6 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Nup35Q8R4R6 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nup35Q8R4R6 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Nup35Q8R4R6 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nup35Q8R4R6 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nup35Q8R4R6 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC14.33□□□□□ -0.12
Nup35Q8R4R6 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nup35Q8R4R6 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nup35Q8R4R6 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Nup35Q8R4R6 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nup35Q8R4R6 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nup35Q8R4R6 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nup35Q8R4R6 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Nup35Q8R4R6 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup35Q8R4R6 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup35Q8R4R6 Gm16401-202ENSMUST00000197463 2074 ntBASIC14.32□□□□□ -0.12
Nup35Q8R4R6 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup35Q8R4R6 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup35Q8R4R6 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC14.32□□□□□ -0.12
Nup35Q8R4R6 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup35Q8R4R6 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup35Q8R4R6 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC14.32□□□□□ -0.12
Nup35Q8R4R6 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nup35Q8R4R6 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC14.32□□□□□ -0.12
Nup35Q8R4R6 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup35Q8R4R6 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC14.32□□□□□ -0.12
Nup35Q8R4R6 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Nup35Q8R4R6 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC14.32□□□□□ -0.12
Nup35Q8R4R6 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup35Q8R4R6 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nup35Q8R4R6 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Nup35Q8R4R6 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup35Q8R4R6 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup35Q8R4R6 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup35Q8R4R6 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup35Q8R4R6 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nup35Q8R4R6 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nup35Q8R4R6 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nup35Q8R4R6 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nup35Q8R4R6 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nup35Q8R4R6 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nup35Q8R4R6 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC14.31□□□□□ -0.12
Nup35Q8R4R6 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nup35Q8R4R6 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC14.31□□□□□ -0.12
Nup35Q8R4R6 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Nup35Q8R4R6 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nup35Q8R4R6 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nup35Q8R4R6 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC14.31□□□□□ -0.12
Nup35Q8R4R6 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nup35Q8R4R6 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Nup35Q8R4R6 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nup35Q8R4R6 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nup35Q8R4R6 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nup35Q8R4R6 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Nup35Q8R4R6 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nup35Q8R4R6 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Nup35Q8R4R6 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nup35Q8R4R6 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Nup35Q8R4R6 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Nup35Q8R4R6 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nup35Q8R4R6 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC14.3□□□□□ -0.12
Nup35Q8R4R6 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Nup35Q8R4R6 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC14.3□□□□□ -0.12
Nup35Q8R4R6 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nup35Q8R4R6 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
Nup35Q8R4R6 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nup35Q8R4R6 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Nup35Q8R4R6 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Nup35Q8R4R6 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms