Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Atf7Q8R0S1 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC20.71■□□□□ 0.91
Atf7Q8R0S1 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Atf7Q8R0S1 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Atf7Q8R0S1 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Atf7Q8R0S1 Gm37519-201ENSMUST00000191687 2210 ntBASIC20.7■□□□□ 0.9
Atf7Q8R0S1 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Atf7Q8R0S1 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Atf7Q8R0S1 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Atf7Q8R0S1 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Atf7Q8R0S1 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Atf7Q8R0S1 Gm5643-201ENSMUST00000117081 966 ntBASIC20.7■□□□□ 0.9
Atf7Q8R0S1 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC20.7■□□□□ 0.9
Atf7Q8R0S1 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Atf7Q8R0S1 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Atf7Q8R0S1 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Atf7Q8R0S1 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Atf7Q8R0S1 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Atf7Q8R0S1 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Atf7Q8R0S1 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC20.7■□□□□ 0.9
Atf7Q8R0S1 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Atf7Q8R0S1 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Atf7Q8R0S1 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Atf7Q8R0S1 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Atf7Q8R0S1 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Atf7Q8R0S1 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Atf7Q8R0S1 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC20.69■□□□□ 0.9
Atf7Q8R0S1 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Atf7Q8R0S1 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC20.69■□□□□ 0.9
Atf7Q8R0S1 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Atf7Q8R0S1 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Atf7Q8R0S1 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Atf7Q8R0S1 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Atf7Q8R0S1 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Atf7Q8R0S1 Gm37292-201ENSMUST00000192062 758 ntBASIC20.69■□□□□ 0.9
Atf7Q8R0S1 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Atf7Q8R0S1 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Atf7Q8R0S1 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Atf7Q8R0S1 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC20.69■□□□□ 0.9
Atf7Q8R0S1 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Atf7Q8R0S1 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Atf7Q8R0S1 Gm6598-201ENSMUST00000202719 2615 ntBASIC20.69■□□□□ 0.9
Atf7Q8R0S1 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Atf7Q8R0S1 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Atf7Q8R0S1 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
Atf7Q8R0S1 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Atf7Q8R0S1 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Atf7Q8R0S1 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC20.68■□□□□ 0.9
Atf7Q8R0S1 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Atf7Q8R0S1 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Atf7Q8R0S1 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Atf7Q8R0S1 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Atf7Q8R0S1 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Atf7Q8R0S1 Gm43808-201ENSMUST00000202534 2065 ntBASIC20.68■□□□□ 0.9
Atf7Q8R0S1 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Atf7Q8R0S1 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Atf7Q8R0S1 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Atf7Q8R0S1 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Atf7Q8R0S1 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Atf7Q8R0S1 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Atf7Q8R0S1 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC20.67■□□□□ 0.9
Atf7Q8R0S1 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Atf7Q8R0S1 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Atf7Q8R0S1 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Atf7Q8R0S1 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Atf7Q8R0S1 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Atf7Q8R0S1 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Atf7Q8R0S1 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Atf7Q8R0S1 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Atf7Q8R0S1 Gm10653-202ENSMUST00000139570 835 ntBASIC20.66■□□□□ 0.9
Atf7Q8R0S1 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC20.66■□□□□ 0.9
Atf7Q8R0S1 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Atf7Q8R0S1 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC20.66■□□□□ 0.9
Atf7Q8R0S1 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC20.66■□□□□ 0.9
Atf7Q8R0S1 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Atf7Q8R0S1 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Atf7Q8R0S1 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Atf7Q8R0S1 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Atf7Q8R0S1 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Atf7Q8R0S1 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Atf7Q8R0S1 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Atf7Q8R0S1 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Atf7Q8R0S1 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
Atf7Q8R0S1 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Atf7Q8R0S1 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Atf7Q8R0S1 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Atf7Q8R0S1 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Atf7Q8R0S1 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Atf7Q8R0S1 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Atf7Q8R0S1 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Atf7Q8R0S1 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Atf7Q8R0S1 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC20.65■□□□□ 0.9
Atf7Q8R0S1 Gm12669-201ENSMUST00000122162 1009 ntBASIC20.65■□□□□ 0.9
Atf7Q8R0S1 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Atf7Q8R0S1 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Atf7Q8R0S1 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Atf7Q8R0S1 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Atf7Q8R0S1 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Atf7Q8R0S1 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Atf7Q8R0S1 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms