Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Sf3a1Q8K4Z5 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Sf3a1Q8K4Z5 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Sf3a1Q8K4Z5 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Sf3a1Q8K4Z5 Gm44832-201ENSMUST00000208849 2303 ntBASIC21.45■■□□□ 1.02
Sf3a1Q8K4Z5 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Sf3a1Q8K4Z5 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Sf3a1Q8K4Z5 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Sf3a1Q8K4Z5 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Sf3a1Q8K4Z5 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC21.45■■□□□ 1.02
Sf3a1Q8K4Z5 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Sf3a1Q8K4Z5 AC175538.1-201ENSMUST00000225343 1269 ntBASIC21.45■■□□□ 1.02
Sf3a1Q8K4Z5 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Sf3a1Q8K4Z5 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Sf3a1Q8K4Z5 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Sf3a1Q8K4Z5 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Sf3a1Q8K4Z5 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC21.44■■□□□ 1.02
Sf3a1Q8K4Z5 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Sf3a1Q8K4Z5 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC21.44■■□□□ 1.02
Sf3a1Q8K4Z5 Mir1199-201ENSMUST00000117015 119 ntBASIC21.44■■□□□ 1.02
Sf3a1Q8K4Z5 Gm13181-201ENSMUST00000120117 1069 ntBASIC21.44■■□□□ 1.02
Sf3a1Q8K4Z5 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Sf3a1Q8K4Z5 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Sf3a1Q8K4Z5 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Sf3a1Q8K4Z5 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Sf3a1Q8K4Z5 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Sf3a1Q8K4Z5 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Sf3a1Q8K4Z5 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Sf3a1Q8K4Z5 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Sf3a1Q8K4Z5 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Sf3a1Q8K4Z5 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Sf3a1Q8K4Z5 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC21.43■■□□□ 1.02
Sf3a1Q8K4Z5 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Sf3a1Q8K4Z5 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC21.43■■□□□ 1.02
Sf3a1Q8K4Z5 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Sf3a1Q8K4Z5 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Sf3a1Q8K4Z5 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Sf3a1Q8K4Z5 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Sf3a1Q8K4Z5 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Sf3a1Q8K4Z5 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Sf3a1Q8K4Z5 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Sf3a1Q8K4Z5 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Sf3a1Q8K4Z5 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Sf3a1Q8K4Z5 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC21.43■■□□□ 1.02
Sf3a1Q8K4Z5 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
Sf3a1Q8K4Z5 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Sf3a1Q8K4Z5 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Sf3a1Q8K4Z5 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Sf3a1Q8K4Z5 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Sf3a1Q8K4Z5 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Sf3a1Q8K4Z5 Gm10461-201ENSMUST00000202073 4786 ntBASIC21.42■■□□□ 1.02
Sf3a1Q8K4Z5 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
Sf3a1Q8K4Z5 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Sf3a1Q8K4Z5 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Sf3a1Q8K4Z5 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Sf3a1Q8K4Z5 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Sf3a1Q8K4Z5 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Sf3a1Q8K4Z5 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Sf3a1Q8K4Z5 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Sf3a1Q8K4Z5 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Sf3a1Q8K4Z5 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Sf3a1Q8K4Z5 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC21.41■■□□□ 1.02
Sf3a1Q8K4Z5 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Sf3a1Q8K4Z5 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Sf3a1Q8K4Z5 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Sf3a1Q8K4Z5 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC21.41■■□□□ 1.02
Sf3a1Q8K4Z5 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC21.41■■□□□ 1.02
Sf3a1Q8K4Z5 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC21.41■■□□□ 1.02
Sf3a1Q8K4Z5 Arhgef33-211ENSMUST00000225658 473 ntBASIC21.41■■□□□ 1.02
Sf3a1Q8K4Z5 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Sf3a1Q8K4Z5 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Sf3a1Q8K4Z5 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Sf3a1Q8K4Z5 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC21.41■■□□□ 1.02
Sf3a1Q8K4Z5 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Sf3a1Q8K4Z5 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Sf3a1Q8K4Z5 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Sf3a1Q8K4Z5 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Sf3a1Q8K4Z5 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Sf3a1Q8K4Z5 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC21.4■■□□□ 1.02
Sf3a1Q8K4Z5 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Sf3a1Q8K4Z5 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Sf3a1Q8K4Z5 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Sf3a1Q8K4Z5 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC21.4■■□□□ 1.02
Sf3a1Q8K4Z5 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Sf3a1Q8K4Z5 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Sf3a1Q8K4Z5 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Sf3a1Q8K4Z5 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Sf3a1Q8K4Z5 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
Sf3a1Q8K4Z5 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC21.39■■□□□ 1.02
Sf3a1Q8K4Z5 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Sf3a1Q8K4Z5 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Sf3a1Q8K4Z5 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Sf3a1Q8K4Z5 Gm10517-202ENSMUST00000192970 758 ntBASIC21.39■■□□□ 1.01
Sf3a1Q8K4Z5 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Sf3a1Q8K4Z5 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC21.39■■□□□ 1.01
Sf3a1Q8K4Z5 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC21.39■■□□□ 1.01
Sf3a1Q8K4Z5 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Sf3a1Q8K4Z5 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC21.39■■□□□ 1.01
Sf3a1Q8K4Z5 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Sf3a1Q8K4Z5 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms