Protein–RNA interactions for Protein: Q8K4G2

Col23a1, Collagen alpha-1(XXIII) chain, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col23a1Q8K4G2 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Col23a1Q8K4G2 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Col23a1Q8K4G2 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Col23a1Q8K4G2 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Col23a1Q8K4G2 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Col23a1Q8K4G2 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Col23a1Q8K4G2 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Col23a1Q8K4G2 Gm7935-201ENSMUST00000100555 1278 ntBASIC21.33■■□□□ 1.01
Col23a1Q8K4G2 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC21.33■■□□□ 1.01
Col23a1Q8K4G2 Rps4l-201ENSMUST00000071745 943 ntBASIC21.33■■□□□ 1.01
Col23a1Q8K4G2 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Col23a1Q8K4G2 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Col23a1Q8K4G2 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Col23a1Q8K4G2 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Col23a1Q8K4G2 Gm7856-201ENSMUST00000117514 1493 ntBASIC21.32■■□□□ 1
Col23a1Q8K4G2 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
Col23a1Q8K4G2 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Col23a1Q8K4G2 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Col23a1Q8K4G2 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Col23a1Q8K4G2 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC21.32■■□□□ 1
Col23a1Q8K4G2 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Col23a1Q8K4G2 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Col23a1Q8K4G2 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC21.32■■□□□ 1
Col23a1Q8K4G2 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC21.31■■□□□ 1
Col23a1Q8K4G2 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Col23a1Q8K4G2 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Col23a1Q8K4G2 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Col23a1Q8K4G2 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Col23a1Q8K4G2 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Col23a1Q8K4G2 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Col23a1Q8K4G2 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC21.31■■□□□ 1
Col23a1Q8K4G2 Gm42922-201ENSMUST00000195887 2078 ntBASIC21.31■■□□□ 1
Col23a1Q8K4G2 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Col23a1Q8K4G2 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Col23a1Q8K4G2 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Col23a1Q8K4G2 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Col23a1Q8K4G2 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC21.3■■□□□ 1
Col23a1Q8K4G2 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Col23a1Q8K4G2 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Col23a1Q8K4G2 Gm43332-201ENSMUST00000202511 1044 ntBASIC21.3■■□□□ 1
Col23a1Q8K4G2 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC21.3■■□□□ 1
Col23a1Q8K4G2 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC21.3■■□□□ 1
Col23a1Q8K4G2 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Col23a1Q8K4G2 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC21.3■■□□□ 1
Col23a1Q8K4G2 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
Col23a1Q8K4G2 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC21.3■■□□□ 1
Col23a1Q8K4G2 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC21.3■■□□□ 1
Col23a1Q8K4G2 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Col23a1Q8K4G2 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Col23a1Q8K4G2 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Col23a1Q8K4G2 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Col23a1Q8K4G2 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC21.29■■□□□ 1
Col23a1Q8K4G2 Gm1818-201ENSMUST00000169406 1184 ntBASIC21.29■■□□□ 1
Col23a1Q8K4G2 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC21.29■■□□□ 1
Col23a1Q8K4G2 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC21.29■■□□□ 1
Col23a1Q8K4G2 Gm8000-201ENSMUST00000188378 592 ntBASIC21.29■■□□□ 1
Col23a1Q8K4G2 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Col23a1Q8K4G2 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Col23a1Q8K4G2 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Col23a1Q8K4G2 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Col23a1Q8K4G2 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC21.29■■□□□ 1
Col23a1Q8K4G2 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Col23a1Q8K4G2 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Col23a1Q8K4G2 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Col23a1Q8K4G2 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Col23a1Q8K4G2 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Col23a1Q8K4G2 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Col23a1Q8K4G2 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Col23a1Q8K4G2 Gm12644-201ENSMUST00000119935 606 ntBASIC21.28■■□□□ 1
Col23a1Q8K4G2 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Col23a1Q8K4G2 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC21.28■■□□□ 1
Col23a1Q8K4G2 AC154621.1-201ENSMUST00000226155 1119 ntBASIC21.28■■□□□ 1
Col23a1Q8K4G2 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Col23a1Q8K4G2 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC21.28■■□□□ 1
Col23a1Q8K4G2 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Col23a1Q8K4G2 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Col23a1Q8K4G2 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Col23a1Q8K4G2 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC21.27■■□□□ 1
Col23a1Q8K4G2 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC21.27■■□□□ 1
Col23a1Q8K4G2 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC21.27■■□□□ 1
Col23a1Q8K4G2 Gm6296-201ENSMUST00000222599 943 ntBASIC21.27■■□□□ 1
Col23a1Q8K4G2 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC21.27■■□□□ 1
Col23a1Q8K4G2 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Col23a1Q8K4G2 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Col23a1Q8K4G2 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Col23a1Q8K4G2 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
Col23a1Q8K4G2 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Col23a1Q8K4G2 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC21.26■□□□□ 0.99
Col23a1Q8K4G2 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Col23a1Q8K4G2 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
Col23a1Q8K4G2 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Col23a1Q8K4G2 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC21.26■□□□□ 0.99
Col23a1Q8K4G2 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Col23a1Q8K4G2 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Col23a1Q8K4G2 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Col23a1Q8K4G2 Gm7862-201ENSMUST00000121461 292 ntBASIC21.26■□□□□ 0.99
Col23a1Q8K4G2 Mir5131-201ENSMUST00000175426 93 ntBASIC21.26■□□□□ 0.99
Col23a1Q8K4G2 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Col23a1Q8K4G2 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Col23a1Q8K4G2 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms