Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Mir6349-201ENSMUST00000184059 97 ntBASIC20.75■□□□□ 0.91
Cchcr1Q8K2I2 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Cchcr1Q8K2I2 Gm4968-201ENSMUST00000071458 858 ntBASIC20.75■□□□□ 0.91
Cchcr1Q8K2I2 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cchcr1Q8K2I2 Gm37519-201ENSMUST00000191687 2210 ntBASIC20.75■□□□□ 0.91
Cchcr1Q8K2I2 Gm43272-201ENSMUST00000200599 1584 ntBASIC20.75■□□□□ 0.91
Cchcr1Q8K2I2 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cchcr1Q8K2I2 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cchcr1Q8K2I2 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Cchcr1Q8K2I2 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cchcr1Q8K2I2 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Cchcr1Q8K2I2 Gm37820-201ENSMUST00000194021 2147 ntBASIC20.74■□□□□ 0.91
Cchcr1Q8K2I2 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cchcr1Q8K2I2 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Cchcr1Q8K2I2 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cchcr1Q8K2I2 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC20.74■□□□□ 0.91
Cchcr1Q8K2I2 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC20.74■□□□□ 0.91
Cchcr1Q8K2I2 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC20.74■□□□□ 0.91
Cchcr1Q8K2I2 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Cchcr1Q8K2I2 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cchcr1Q8K2I2 Gm29241-201ENSMUST00000189260 1096 ntBASIC20.74■□□□□ 0.91
Cchcr1Q8K2I2 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Cchcr1Q8K2I2 AC121598.2-201ENSMUST00000228376 2325 ntBASIC20.74■□□□□ 0.91
Cchcr1Q8K2I2 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cchcr1Q8K2I2 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cchcr1Q8K2I2 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cchcr1Q8K2I2 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cchcr1Q8K2I2 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cchcr1Q8K2I2 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Cchcr1Q8K2I2 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cchcr1Q8K2I2 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
Cchcr1Q8K2I2 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cchcr1Q8K2I2 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cchcr1Q8K2I2 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Cchcr1Q8K2I2 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Cchcr1Q8K2I2 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Cchcr1Q8K2I2 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cchcr1Q8K2I2 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cchcr1Q8K2I2 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cchcr1Q8K2I2 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cchcr1Q8K2I2 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Cchcr1Q8K2I2 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cchcr1Q8K2I2 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cchcr1Q8K2I2 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC20.72■□□□□ 0.91
Cchcr1Q8K2I2 Gm10138-203ENSMUST00000206952 366 ntBASIC20.72■□□□□ 0.91
Cchcr1Q8K2I2 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC20.72■□□□□ 0.91
Cchcr1Q8K2I2 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC20.72■□□□□ 0.91
Cchcr1Q8K2I2 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Cchcr1Q8K2I2 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cchcr1Q8K2I2 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cchcr1Q8K2I2 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cchcr1Q8K2I2 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Cchcr1Q8K2I2 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cchcr1Q8K2I2 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Cchcr1Q8K2I2 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cchcr1Q8K2I2 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cchcr1Q8K2I2 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cchcr1Q8K2I2 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC20.72■□□□□ 0.91
Cchcr1Q8K2I2 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Cchcr1Q8K2I2 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cchcr1Q8K2I2 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cchcr1Q8K2I2 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cchcr1Q8K2I2 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Cchcr1Q8K2I2 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cchcr1Q8K2I2 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
Cchcr1Q8K2I2 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cchcr1Q8K2I2 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cchcr1Q8K2I2 Gm11643-201ENSMUST00000119578 864 ntBASIC20.71■□□□□ 0.91
Cchcr1Q8K2I2 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cchcr1Q8K2I2 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cchcr1Q8K2I2 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Cchcr1Q8K2I2 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cchcr1Q8K2I2 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cchcr1Q8K2I2 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Cchcr1Q8K2I2 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cchcr1Q8K2I2 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC20.71■□□□□ 0.91
Cchcr1Q8K2I2 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Cchcr1Q8K2I2 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Cchcr1Q8K2I2 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cchcr1Q8K2I2 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Cchcr1Q8K2I2 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Cchcr1Q8K2I2 Gm43859-201ENSMUST00000200075 1412 ntBASIC20.7■□□□□ 0.9
Cchcr1Q8K2I2 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cchcr1Q8K2I2 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cchcr1Q8K2I2 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cchcr1Q8K2I2 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Cchcr1Q8K2I2 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cchcr1Q8K2I2 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cchcr1Q8K2I2 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Cchcr1Q8K2I2 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Cchcr1Q8K2I2 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC20.7■□□□□ 0.9
Cchcr1Q8K2I2 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cchcr1Q8K2I2 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cchcr1Q8K2I2 Mtag2-201ENSMUST00000058665 714 ntBASIC20.7■□□□□ 0.9
Cchcr1Q8K2I2 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cchcr1Q8K2I2 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cchcr1Q8K2I2 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cchcr1Q8K2I2 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Cchcr1Q8K2I2 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cchcr1Q8K2I2 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 170.9 ms