Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Syne4Q8CII8 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC19.85■□□□□ 0.77
Syne4Q8CII8 Gm45328-201ENSMUST00000210942 917 ntBASIC19.85■□□□□ 0.77
Syne4Q8CII8 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Syne4Q8CII8 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Syne4Q8CII8 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Syne4Q8CII8 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Syne4Q8CII8 Actl10-202ENSMUST00000226583 1501 ntBASIC19.85■□□□□ 0.77
Syne4Q8CII8 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Syne4Q8CII8 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Syne4Q8CII8 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Syne4Q8CII8 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Syne4Q8CII8 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Syne4Q8CII8 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Syne4Q8CII8 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.84■□□□□ 0.77
Syne4Q8CII8 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Syne4Q8CII8 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Syne4Q8CII8 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC19.84■□□□□ 0.77
Syne4Q8CII8 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC19.84■□□□□ 0.77
Syne4Q8CII8 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Syne4Q8CII8 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Syne4Q8CII8 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Syne4Q8CII8 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
Syne4Q8CII8 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Syne4Q8CII8 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Syne4Q8CII8 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC19.83■□□□□ 0.77
Syne4Q8CII8 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Syne4Q8CII8 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Syne4Q8CII8 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Syne4Q8CII8 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.76
Syne4Q8CII8 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.83■□□□□ 0.76
Syne4Q8CII8 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Syne4Q8CII8 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Syne4Q8CII8 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Syne4Q8CII8 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
Syne4Q8CII8 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
Syne4Q8CII8 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.82■□□□□ 0.76
Syne4Q8CII8 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Syne4Q8CII8 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
Syne4Q8CII8 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Syne4Q8CII8 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Syne4Q8CII8 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC19.82■□□□□ 0.76
Syne4Q8CII8 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Syne4Q8CII8 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC19.82■□□□□ 0.76
Syne4Q8CII8 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.82■□□□□ 0.76
Syne4Q8CII8 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Syne4Q8CII8 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Syne4Q8CII8 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC19.82■□□□□ 0.76
Syne4Q8CII8 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Syne4Q8CII8 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Syne4Q8CII8 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Syne4Q8CII8 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Syne4Q8CII8 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Syne4Q8CII8 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Syne4Q8CII8 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Syne4Q8CII8 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Syne4Q8CII8 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.81■□□□□ 0.76
Syne4Q8CII8 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Syne4Q8CII8 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Syne4Q8CII8 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Syne4Q8CII8 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC19.81■□□□□ 0.76
Syne4Q8CII8 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Syne4Q8CII8 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Syne4Q8CII8 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Syne4Q8CII8 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Syne4Q8CII8 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Syne4Q8CII8 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Syne4Q8CII8 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Syne4Q8CII8 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Syne4Q8CII8 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Syne4Q8CII8 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Syne4Q8CII8 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Syne4Q8CII8 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC19.8■□□□□ 0.76
Syne4Q8CII8 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Syne4Q8CII8 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC19.8■□□□□ 0.76
Syne4Q8CII8 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Syne4Q8CII8 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
Syne4Q8CII8 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Syne4Q8CII8 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Syne4Q8CII8 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC19.8■□□□□ 0.76
Syne4Q8CII8 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC19.8■□□□□ 0.76
Syne4Q8CII8 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Syne4Q8CII8 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Syne4Q8CII8 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Syne4Q8CII8 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Syne4Q8CII8 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Syne4Q8CII8 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Syne4Q8CII8 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Syne4Q8CII8 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Syne4Q8CII8 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Syne4Q8CII8 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Syne4Q8CII8 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Syne4Q8CII8 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Syne4Q8CII8 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Syne4Q8CII8 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Syne4Q8CII8 Olfr129-201ENSMUST00000122318 993 ntBASIC19.79■□□□□ 0.76
Syne4Q8CII8 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC19.79■□□□□ 0.76
Syne4Q8CII8 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Syne4Q8CII8 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Syne4Q8CII8 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms