Protein–RNA interactions for Protein: Q8CIG0

Depdc1a, DEP domain-containing protein 1A, mousemouse

Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1aQ8CIG0 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Depdc1aQ8CIG0 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Depdc1aQ8CIG0 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Depdc1aQ8CIG0 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Depdc1aQ8CIG0 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Depdc1aQ8CIG0 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC19.78■□□□□ 0.76
Depdc1aQ8CIG0 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Depdc1aQ8CIG0 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Depdc1aQ8CIG0 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Depdc1aQ8CIG0 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Depdc1aQ8CIG0 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Depdc1aQ8CIG0 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Depdc1aQ8CIG0 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Depdc1aQ8CIG0 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Depdc1aQ8CIG0 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Depdc1aQ8CIG0 Gm17661-201ENSMUST00000170317 270 ntBASIC19.77■□□□□ 0.76
Depdc1aQ8CIG0 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Depdc1aQ8CIG0 Mir5130-201ENSMUST00000175160 84 ntBASIC19.77■□□□□ 0.76
Depdc1aQ8CIG0 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Depdc1aQ8CIG0 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.77■□□□□ 0.76
Depdc1aQ8CIG0 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Depdc1aQ8CIG0 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC19.77■□□□□ 0.75
Depdc1aQ8CIG0 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Depdc1aQ8CIG0 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Depdc1aQ8CIG0 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Depdc1aQ8CIG0 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Depdc1aQ8CIG0 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Depdc1aQ8CIG0 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Depdc1aQ8CIG0 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Depdc1aQ8CIG0 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Depdc1aQ8CIG0 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC19.76■□□□□ 0.75
Depdc1aQ8CIG0 Gm19721-201ENSMUST00000195284 1764 ntBASIC19.76■□□□□ 0.75
Depdc1aQ8CIG0 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Depdc1aQ8CIG0 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Depdc1aQ8CIG0 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Depdc1aQ8CIG0 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Depdc1aQ8CIG0 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC19.76■□□□□ 0.75
Depdc1aQ8CIG0 Gm18032-201ENSMUST00000222541 538 ntBASIC19.76■□□□□ 0.75
Depdc1aQ8CIG0 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC19.76■□□□□ 0.75
Depdc1aQ8CIG0 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Depdc1aQ8CIG0 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Depdc1aQ8CIG0 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Depdc1aQ8CIG0 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Depdc1aQ8CIG0 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Depdc1aQ8CIG0 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Depdc1aQ8CIG0 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Depdc1aQ8CIG0 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Depdc1aQ8CIG0 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Depdc1aQ8CIG0 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Depdc1aQ8CIG0 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Depdc1aQ8CIG0 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Depdc1aQ8CIG0 AC120002.2-201ENSMUST00000220205 773 ntBASIC19.75■□□□□ 0.75
Depdc1aQ8CIG0 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Depdc1aQ8CIG0 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
Depdc1aQ8CIG0 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
Depdc1aQ8CIG0 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Depdc1aQ8CIG0 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Depdc1aQ8CIG0 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Depdc1aQ8CIG0 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Depdc1aQ8CIG0 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Depdc1aQ8CIG0 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Depdc1aQ8CIG0 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC19.74■□□□□ 0.75
Depdc1aQ8CIG0 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Depdc1aQ8CIG0 Fam105a-203ENSMUST00000226170 3043 ntBASIC19.74■□□□□ 0.75
Depdc1aQ8CIG0 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Depdc1aQ8CIG0 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC19.74■□□□□ 0.75
Depdc1aQ8CIG0 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Depdc1aQ8CIG0 Gm7370-201ENSMUST00000219471 767 ntBASIC19.74■□□□□ 0.75
Depdc1aQ8CIG0 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Depdc1aQ8CIG0 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Depdc1aQ8CIG0 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC19.74■□□□□ 0.75
Depdc1aQ8CIG0 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Depdc1aQ8CIG0 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC19.74■□□□□ 0.75
Depdc1aQ8CIG0 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Depdc1aQ8CIG0 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Depdc1aQ8CIG0 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Depdc1aQ8CIG0 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Depdc1aQ8CIG0 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Depdc1aQ8CIG0 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Depdc1aQ8CIG0 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Depdc1aQ8CIG0 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Depdc1aQ8CIG0 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Depdc1aQ8CIG0 Gm16061-201ENSMUST00000122167 857 ntBASIC19.73■□□□□ 0.75
Depdc1aQ8CIG0 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Depdc1aQ8CIG0 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Depdc1aQ8CIG0 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Depdc1aQ8CIG0 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC19.73■□□□□ 0.75
Depdc1aQ8CIG0 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Depdc1aQ8CIG0 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Depdc1aQ8CIG0 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC19.72■□□□□ 0.75
Depdc1aQ8CIG0 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC19.72■□□□□ 0.75
Depdc1aQ8CIG0 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC19.72■□□□□ 0.75
Depdc1aQ8CIG0 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Depdc1aQ8CIG0 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Depdc1aQ8CIG0 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Depdc1aQ8CIG0 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Depdc1aQ8CIG0 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Depdc1aQ8CIG0 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Depdc1aQ8CIG0 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Depdc1aQ8CIG0 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms