Protein–RNA interactions for Protein: Q8CHX7

Rftn2, Raftlin-2, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rftn2Q8CHX7 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rftn2Q8CHX7 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Rftn2Q8CHX7 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Rftn2Q8CHX7 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC18.66■□□□□ 0.58
Rftn2Q8CHX7 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rftn2Q8CHX7 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC18.66■□□□□ 0.58
Rftn2Q8CHX7 Gm45058-201ENSMUST00000205810 766 ntBASIC18.66■□□□□ 0.58
Rftn2Q8CHX7 Gm7791-201ENSMUST00000219066 539 ntBASIC18.66■□□□□ 0.58
Rftn2Q8CHX7 Il3ra-202ENSMUST00000223589 738 ntBASIC18.66■□□□□ 0.58
Rftn2Q8CHX7 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rftn2Q8CHX7 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Rftn2Q8CHX7 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rftn2Q8CHX7 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rftn2Q8CHX7 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rftn2Q8CHX7 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rftn2Q8CHX7 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rftn2Q8CHX7 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rftn2Q8CHX7 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rftn2Q8CHX7 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.65■□□□□ 0.58
Rftn2Q8CHX7 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rftn2Q8CHX7 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC18.65■□□□□ 0.58
Rftn2Q8CHX7 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rftn2Q8CHX7 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rftn2Q8CHX7 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
Rftn2Q8CHX7 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rftn2Q8CHX7 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC18.65■□□□□ 0.58
Rftn2Q8CHX7 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rftn2Q8CHX7 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Rftn2Q8CHX7 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rftn2Q8CHX7 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rftn2Q8CHX7 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Rftn2Q8CHX7 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
Rftn2Q8CHX7 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rftn2Q8CHX7 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rftn2Q8CHX7 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
Rftn2Q8CHX7 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Rftn2Q8CHX7 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rftn2Q8CHX7 Gm17661-201ENSMUST00000170317 270 ntBASIC18.64■□□□□ 0.57
Rftn2Q8CHX7 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rftn2Q8CHX7 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rftn2Q8CHX7 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Rftn2Q8CHX7 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Rftn2Q8CHX7 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rftn2Q8CHX7 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Rftn2Q8CHX7 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rftn2Q8CHX7 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rftn2Q8CHX7 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Rftn2Q8CHX7 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Rftn2Q8CHX7 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Rftn2Q8CHX7 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rftn2Q8CHX7 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC18.63■□□□□ 0.57
Rftn2Q8CHX7 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rftn2Q8CHX7 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC18.63■□□□□ 0.57
Rftn2Q8CHX7 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rftn2Q8CHX7 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rftn2Q8CHX7 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.63■□□□□ 0.57
Rftn2Q8CHX7 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rftn2Q8CHX7 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Rftn2Q8CHX7 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rftn2Q8CHX7 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Rftn2Q8CHX7 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Rftn2Q8CHX7 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rftn2Q8CHX7 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rftn2Q8CHX7 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rftn2Q8CHX7 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rftn2Q8CHX7 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rftn2Q8CHX7 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Rftn2Q8CHX7 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.62■□□□□ 0.57
Rftn2Q8CHX7 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rftn2Q8CHX7 Gm16061-201ENSMUST00000122167 857 ntBASIC18.62■□□□□ 0.57
Rftn2Q8CHX7 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rftn2Q8CHX7 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Rftn2Q8CHX7 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rftn2Q8CHX7 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rftn2Q8CHX7 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rftn2Q8CHX7 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rftn2Q8CHX7 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rftn2Q8CHX7 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rftn2Q8CHX7 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rftn2Q8CHX7 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Rftn2Q8CHX7 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rftn2Q8CHX7 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rftn2Q8CHX7 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rftn2Q8CHX7 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rftn2Q8CHX7 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rftn2Q8CHX7 Mir5130-201ENSMUST00000175160 84 ntBASIC18.61■□□□□ 0.57
Rftn2Q8CHX7 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC18.61■□□□□ 0.57
Rftn2Q8CHX7 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rftn2Q8CHX7 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rftn2Q8CHX7 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rftn2Q8CHX7 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rftn2Q8CHX7 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Rftn2Q8CHX7 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rftn2Q8CHX7 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rftn2Q8CHX7 Gm13474-201ENSMUST00000122466 815 ntBASIC18.6■□□□□ 0.57
Rftn2Q8CHX7 AC120002.2-201ENSMUST00000220205 773 ntBASIC18.6■□□□□ 0.57
Rftn2Q8CHX7 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Rftn2Q8CHX7 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rftn2Q8CHX7 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.6■□□□□ 0.57
Rftn2Q8CHX7 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 11.1 ms