Protein–RNA interactions for Protein: Q8CHP0

Zc3h3, Zinc finger CCCH domain-containing protein 3, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h3Q8CHP0 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Zc3h3Q8CHP0 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Zc3h3Q8CHP0 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.14■□□□□ 0.33
Zc3h3Q8CHP0 Gm7935-201ENSMUST00000100555 1278 ntBASIC17.14■□□□□ 0.33
Zc3h3Q8CHP0 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC17.14■□□□□ 0.33
Zc3h3Q8CHP0 Gm43332-201ENSMUST00000202511 1044 ntBASIC17.14■□□□□ 0.33
Zc3h3Q8CHP0 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Zc3h3Q8CHP0 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Zc3h3Q8CHP0 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Zc3h3Q8CHP0 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Zc3h3Q8CHP0 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Zc3h3Q8CHP0 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Zc3h3Q8CHP0 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Zc3h3Q8CHP0 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Zc3h3Q8CHP0 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Zc3h3Q8CHP0 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.13■□□□□ 0.33
Zc3h3Q8CHP0 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Zc3h3Q8CHP0 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC17.13■□□□□ 0.33
Zc3h3Q8CHP0 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Zc3h3Q8CHP0 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Zc3h3Q8CHP0 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Zc3h3Q8CHP0 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Zc3h3Q8CHP0 Gm1818-201ENSMUST00000169406 1184 ntBASIC17.13■□□□□ 0.33
Zc3h3Q8CHP0 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Zc3h3Q8CHP0 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Zc3h3Q8CHP0 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Zc3h3Q8CHP0 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Zc3h3Q8CHP0 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Zc3h3Q8CHP0 Rps4l-201ENSMUST00000071745 943 ntBASIC17.13■□□□□ 0.33
Zc3h3Q8CHP0 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Zc3h3Q8CHP0 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Zc3h3Q8CHP0 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Zc3h3Q8CHP0 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Zc3h3Q8CHP0 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Zc3h3Q8CHP0 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC17.13■□□□□ 0.33
Zc3h3Q8CHP0 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Zc3h3Q8CHP0 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Zc3h3Q8CHP0 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC17.12■□□□□ 0.33
Zc3h3Q8CHP0 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Zc3h3Q8CHP0 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Zc3h3Q8CHP0 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Zc3h3Q8CHP0 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Zc3h3Q8CHP0 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Zc3h3Q8CHP0 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Zc3h3Q8CHP0 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC17.12■□□□□ 0.33
Zc3h3Q8CHP0 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.12■□□□□ 0.33
Zc3h3Q8CHP0 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
Zc3h3Q8CHP0 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Zc3h3Q8CHP0 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Zc3h3Q8CHP0 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Zc3h3Q8CHP0 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Zc3h3Q8CHP0 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Zc3h3Q8CHP0 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Zc3h3Q8CHP0 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Zc3h3Q8CHP0 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Zc3h3Q8CHP0 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Zc3h3Q8CHP0 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Zc3h3Q8CHP0 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC17.11■□□□□ 0.33
Zc3h3Q8CHP0 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Zc3h3Q8CHP0 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC17.11■□□□□ 0.33
Zc3h3Q8CHP0 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Zc3h3Q8CHP0 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Zc3h3Q8CHP0 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Zc3h3Q8CHP0 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Zc3h3Q8CHP0 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.11■□□□□ 0.33
Zc3h3Q8CHP0 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Zc3h3Q8CHP0 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Zc3h3Q8CHP0 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Zc3h3Q8CHP0 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Zc3h3Q8CHP0 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Zc3h3Q8CHP0 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Zc3h3Q8CHP0 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Zc3h3Q8CHP0 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Zc3h3Q8CHP0 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Zc3h3Q8CHP0 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Zc3h3Q8CHP0 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Zc3h3Q8CHP0 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Zc3h3Q8CHP0 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.1■□□□□ 0.33
Zc3h3Q8CHP0 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC17.1■□□□□ 0.33
Zc3h3Q8CHP0 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Zc3h3Q8CHP0 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.1■□□□□ 0.33
Zc3h3Q8CHP0 AC159093.1-201ENSMUST00000227779 380 ntBASIC17.1■□□□□ 0.33
Zc3h3Q8CHP0 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Zc3h3Q8CHP0 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Zc3h3Q8CHP0 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Zc3h3Q8CHP0 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Zc3h3Q8CHP0 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Zc3h3Q8CHP0 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Zc3h3Q8CHP0 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Zc3h3Q8CHP0 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Zc3h3Q8CHP0 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Zc3h3Q8CHP0 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Zc3h3Q8CHP0 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Zc3h3Q8CHP0 Gm27702-201ENSMUST00000184512 56 ntBASIC17.09■□□□□ 0.33
Zc3h3Q8CHP0 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Zc3h3Q8CHP0 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC17.09■□□□□ 0.33
Zc3h3Q8CHP0 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Zc3h3Q8CHP0 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC17.09■□□□□ 0.33
Zc3h3Q8CHP0 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Zc3h3Q8CHP0 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms