Protein–RNA interactions for Protein: Q8CGP4

Hist1h2aa, Histone H2A, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h2aaQ8CGP4 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hist1h2aaQ8CGP4 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Hist1h2aaQ8CGP4 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Hist1h2aaQ8CGP4 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hist1h2aaQ8CGP4 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hist1h2aaQ8CGP4 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hist1h2aaQ8CGP4 Gm10418-201ENSMUST00000100943 576 ntBASIC16.52■□□□□ 0.24
Hist1h2aaQ8CGP4 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC16.52■□□□□ 0.24
Hist1h2aaQ8CGP4 Gm13158-201ENSMUST00000122007 736 ntBASIC16.52■□□□□ 0.24
Hist1h2aaQ8CGP4 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Hist1h2aaQ8CGP4 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC16.52■□□□□ 0.24
Hist1h2aaQ8CGP4 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hist1h2aaQ8CGP4 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hist1h2aaQ8CGP4 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Hist1h2aaQ8CGP4 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Hist1h2aaQ8CGP4 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Hist1h2aaQ8CGP4 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Hist1h2aaQ8CGP4 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
Hist1h2aaQ8CGP4 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.52■□□□□ 0.23
Hist1h2aaQ8CGP4 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Hist1h2aaQ8CGP4 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Hist1h2aaQ8CGP4 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Hist1h2aaQ8CGP4 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Hist1h2aaQ8CGP4 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hist1h2aaQ8CGP4 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hist1h2aaQ8CGP4 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hist1h2aaQ8CGP4 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hist1h2aaQ8CGP4 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Hist1h2aaQ8CGP4 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hist1h2aaQ8CGP4 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hist1h2aaQ8CGP4 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hist1h2aaQ8CGP4 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hist1h2aaQ8CGP4 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC16.51■□□□□ 0.23
Hist1h2aaQ8CGP4 CT025689.6-201ENSMUST00000224991 1104 ntBASIC16.51■□□□□ 0.23
Hist1h2aaQ8CGP4 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hist1h2aaQ8CGP4 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Hist1h2aaQ8CGP4 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hist1h2aaQ8CGP4 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC16.51■□□□□ 0.23
Hist1h2aaQ8CGP4 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hist1h2aaQ8CGP4 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hist1h2aaQ8CGP4 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hist1h2aaQ8CGP4 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
Hist1h2aaQ8CGP4 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hist1h2aaQ8CGP4 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hist1h2aaQ8CGP4 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Hist1h2aaQ8CGP4 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hist1h2aaQ8CGP4 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hist1h2aaQ8CGP4 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Hist1h2aaQ8CGP4 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hist1h2aaQ8CGP4 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC16.5■□□□□ 0.23
Hist1h2aaQ8CGP4 Mir6349-201ENSMUST00000184059 97 ntBASIC16.5■□□□□ 0.23
Hist1h2aaQ8CGP4 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hist1h2aaQ8CGP4 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Hist1h2aaQ8CGP4 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.5■□□□□ 0.23
Hist1h2aaQ8CGP4 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hist1h2aaQ8CGP4 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hist1h2aaQ8CGP4 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
Hist1h2aaQ8CGP4 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hist1h2aaQ8CGP4 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC16.5■□□□□ 0.23
Hist1h2aaQ8CGP4 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hist1h2aaQ8CGP4 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hist1h2aaQ8CGP4 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC16.49■□□□□ 0.23
Hist1h2aaQ8CGP4 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Hist1h2aaQ8CGP4 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hist1h2aaQ8CGP4 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Hist1h2aaQ8CGP4 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hist1h2aaQ8CGP4 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Hist1h2aaQ8CGP4 Gm27275-201ENSMUST00000184318 272 ntBASIC16.49■□□□□ 0.23
Hist1h2aaQ8CGP4 Trmt13-210ENSMUST00000198454 880 ntBASIC16.49■□□□□ 0.23
Hist1h2aaQ8CGP4 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hist1h2aaQ8CGP4 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hist1h2aaQ8CGP4 Idnk-204ENSMUST00000226010 1898 ntBASIC16.49■□□□□ 0.23
Hist1h2aaQ8CGP4 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Hist1h2aaQ8CGP4 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Hist1h2aaQ8CGP4 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hist1h2aaQ8CGP4 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hist1h2aaQ8CGP4 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Hist1h2aaQ8CGP4 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hist1h2aaQ8CGP4 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.49■□□□□ 0.23
Hist1h2aaQ8CGP4 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hist1h2aaQ8CGP4 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hist1h2aaQ8CGP4 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Hist1h2aaQ8CGP4 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hist1h2aaQ8CGP4 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC16.48■□□□□ 0.23
Hist1h2aaQ8CGP4 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC16.48■□□□□ 0.23
Hist1h2aaQ8CGP4 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hist1h2aaQ8CGP4 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Hist1h2aaQ8CGP4 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Hist1h2aaQ8CGP4 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hist1h2aaQ8CGP4 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hist1h2aaQ8CGP4 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hist1h2aaQ8CGP4 Alkbh1-212ENSMUST00000185301 408 ntBASIC16.48■□□□□ 0.23
Hist1h2aaQ8CGP4 Gm29241-201ENSMUST00000189260 1096 ntBASIC16.48■□□□□ 0.23
Hist1h2aaQ8CGP4 AC163280.1-201ENSMUST00000228194 1100 ntBASIC16.48■□□□□ 0.23
Hist1h2aaQ8CGP4 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hist1h2aaQ8CGP4 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hist1h2aaQ8CGP4 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Hist1h2aaQ8CGP4 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hist1h2aaQ8CGP4 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hist1h2aaQ8CGP4 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms