Protein–RNA interactions for Protein: Q8CG50

Rab43, Ras-related protein Rab-43, mousemouse

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab43Q8CG50 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rab43Q8CG50 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.09■□□□□ 0.33
Rab43Q8CG50 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rab43Q8CG50 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rab43Q8CG50 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rab43Q8CG50 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rab43Q8CG50 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rab43Q8CG50 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rab43Q8CG50 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Rab43Q8CG50 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rab43Q8CG50 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rab43Q8CG50 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rab43Q8CG50 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rab43Q8CG50 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rab43Q8CG50 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rab43Q8CG50 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Rab43Q8CG50 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rab43Q8CG50 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rab43Q8CG50 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rab43Q8CG50 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rab43Q8CG50 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rab43Q8CG50 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rab43Q8CG50 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rab43Q8CG50 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC17.08■□□□□ 0.32
Rab43Q8CG50 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rab43Q8CG50 Gm25016-201ENSMUST00000158399 131 ntBASIC17.08■□□□□ 0.32
Rab43Q8CG50 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rab43Q8CG50 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rab43Q8CG50 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rab43Q8CG50 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rab43Q8CG50 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rab43Q8CG50 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rab43Q8CG50 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.08■□□□□ 0.32
Rab43Q8CG50 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rab43Q8CG50 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rab43Q8CG50 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rab43Q8CG50 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Rab43Q8CG50 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rab43Q8CG50 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rab43Q8CG50 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Rab43Q8CG50 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.07■□□□□ 0.32
Rab43Q8CG50 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rab43Q8CG50 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rab43Q8CG50 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.07■□□□□ 0.32
Rab43Q8CG50 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rab43Q8CG50 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Rab43Q8CG50 Gm14859-201ENSMUST00000117752 357 ntBASIC17.07■□□□□ 0.32
Rab43Q8CG50 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.07■□□□□ 0.32
Rab43Q8CG50 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rab43Q8CG50 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rab43Q8CG50 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.07■□□□□ 0.32
Rab43Q8CG50 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rab43Q8CG50 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rab43Q8CG50 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rab43Q8CG50 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Rab43Q8CG50 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rab43Q8CG50 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rab43Q8CG50 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rab43Q8CG50 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Rab43Q8CG50 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Rab43Q8CG50 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rab43Q8CG50 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rab43Q8CG50 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rab43Q8CG50 Gm37025-201ENSMUST00000195159 829 ntBASIC17.06■□□□□ 0.32
Rab43Q8CG50 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Rab43Q8CG50 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rab43Q8CG50 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rab43Q8CG50 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Rab43Q8CG50 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rab43Q8CG50 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Rab43Q8CG50 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Rab43Q8CG50 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rab43Q8CG50 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Rab43Q8CG50 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Rab43Q8CG50 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.05■□□□□ 0.32
Rab43Q8CG50 Gm27389-201ENSMUST00000183622 195 ntBASIC17.05■□□□□ 0.32
Rab43Q8CG50 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
Rab43Q8CG50 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Rab43Q8CG50 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rab43Q8CG50 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rab43Q8CG50 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rab43Q8CG50 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Rab43Q8CG50 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.05■□□□□ 0.32
Rab43Q8CG50 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rab43Q8CG50 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rab43Q8CG50 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rab43Q8CG50 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rab43Q8CG50 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.04■□□□□ 0.32
Rab43Q8CG50 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Rab43Q8CG50 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rab43Q8CG50 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rab43Q8CG50 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.04■□□□□ 0.32
Rab43Q8CG50 Gm9731-201ENSMUST00000209480 747 ntBASIC17.04■□□□□ 0.32
Rab43Q8CG50 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rab43Q8CG50 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rab43Q8CG50 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rab43Q8CG50 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rab43Q8CG50 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.04■□□□□ 0.32
Rab43Q8CG50 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.04■□□□□ 0.32
Rab43Q8CG50 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms