Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC21.74■■□□□ 1.07
Trim52Q8CDV4 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Trim52Q8CDV4 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trim52Q8CDV4 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trim52Q8CDV4 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trim52Q8CDV4 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Trim52Q8CDV4 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Trim52Q8CDV4 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC21.73■■□□□ 1.07
Trim52Q8CDV4 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trim52Q8CDV4 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trim52Q8CDV4 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC21.73■■□□□ 1.07
Trim52Q8CDV4 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trim52Q8CDV4 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trim52Q8CDV4 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trim52Q8CDV4 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trim52Q8CDV4 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trim52Q8CDV4 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC21.72■■□□□ 1.07
Trim52Q8CDV4 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Trim52Q8CDV4 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Trim52Q8CDV4 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Trim52Q8CDV4 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Trim52Q8CDV4 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trim52Q8CDV4 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trim52Q8CDV4 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trim52Q8CDV4 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC21.72■■□□□ 1.07
Trim52Q8CDV4 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trim52Q8CDV4 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC21.71■■□□□ 1.07
Trim52Q8CDV4 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trim52Q8CDV4 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trim52Q8CDV4 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trim52Q8CDV4 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trim52Q8CDV4 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trim52Q8CDV4 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Trim52Q8CDV4 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Trim52Q8CDV4 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
Trim52Q8CDV4 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC21.71■■□□□ 1.07
Trim52Q8CDV4 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trim52Q8CDV4 Gm5587-201ENSMUST00000206270 674 ntBASIC21.71■■□□□ 1.07
Trim52Q8CDV4 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC21.71■■□□□ 1.07
Trim52Q8CDV4 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC21.71■■□□□ 1.07
Trim52Q8CDV4 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Trim52Q8CDV4 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trim52Q8CDV4 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC21.7■■□□□ 1.06
Trim52Q8CDV4 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC21.7■■□□□ 1.06
Trim52Q8CDV4 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trim52Q8CDV4 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trim52Q8CDV4 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC21.7■■□□□ 1.06
Trim52Q8CDV4 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trim52Q8CDV4 Iqck-206ENSMUST00000208658 2891 ntBASIC21.7■■□□□ 1.06
Trim52Q8CDV4 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Trim52Q8CDV4 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trim52Q8CDV4 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Trim52Q8CDV4 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Trim52Q8CDV4 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trim52Q8CDV4 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Trim52Q8CDV4 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trim52Q8CDV4 Gm3272-201ENSMUST00000181181 1229 ntBASIC21.69■■□□□ 1.06
Trim52Q8CDV4 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC21.69■■□□□ 1.06
Trim52Q8CDV4 Gm10566-201ENSMUST00000086739 996 ntBASIC21.69■■□□□ 1.06
Trim52Q8CDV4 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trim52Q8CDV4 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Trim52Q8CDV4 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trim52Q8CDV4 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trim52Q8CDV4 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trim52Q8CDV4 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trim52Q8CDV4 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC21.68■■□□□ 1.06
Trim52Q8CDV4 Gm9013-201ENSMUST00000132939 882 ntBASIC21.68■■□□□ 1.06
Trim52Q8CDV4 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Trim52Q8CDV4 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
Trim52Q8CDV4 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trim52Q8CDV4 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trim52Q8CDV4 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trim52Q8CDV4 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Trim52Q8CDV4 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trim52Q8CDV4 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC21.68■■□□□ 1.06
Trim52Q8CDV4 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trim52Q8CDV4 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Trim52Q8CDV4 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trim52Q8CDV4 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trim52Q8CDV4 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trim52Q8CDV4 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trim52Q8CDV4 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trim52Q8CDV4 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trim52Q8CDV4 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
Trim52Q8CDV4 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trim52Q8CDV4 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trim52Q8CDV4 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trim52Q8CDV4 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trim52Q8CDV4 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC21.67■■□□□ 1.06
Trim52Q8CDV4 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC21.67■■□□□ 1.06
Trim52Q8CDV4 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trim52Q8CDV4 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trim52Q8CDV4 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trim52Q8CDV4 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC21.67■■□□□ 1.06
Trim52Q8CDV4 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trim52Q8CDV4 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trim52Q8CDV4 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trim52Q8CDV4 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Trim52Q8CDV4 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trim52Q8CDV4 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms