Protein–RNA interactions for Protein: Q8C7R7

Rfx6, DNA-binding protein RFX6, mousemouse

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx6Q8C7R7 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Rfx6Q8C7R7 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.84■□□□□ 0.45
Rfx6Q8C7R7 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rfx6Q8C7R7 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Rfx6Q8C7R7 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Rfx6Q8C7R7 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Rfx6Q8C7R7 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rfx6Q8C7R7 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.84■□□□□ 0.45
Rfx6Q8C7R7 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rfx6Q8C7R7 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rfx6Q8C7R7 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rfx6Q8C7R7 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.83■□□□□ 0.45
Rfx6Q8C7R7 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.83■□□□□ 0.45
Rfx6Q8C7R7 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.83■□□□□ 0.45
Rfx6Q8C7R7 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rfx6Q8C7R7 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rfx6Q8C7R7 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rfx6Q8C7R7 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rfx6Q8C7R7 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Rfx6Q8C7R7 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Rfx6Q8C7R7 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rfx6Q8C7R7 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Rfx6Q8C7R7 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Rfx6Q8C7R7 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.83■□□□□ 0.44
Rfx6Q8C7R7 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rfx6Q8C7R7 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rfx6Q8C7R7 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rfx6Q8C7R7 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rfx6Q8C7R7 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rfx6Q8C7R7 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rfx6Q8C7R7 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rfx6Q8C7R7 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.82■□□□□ 0.44
Rfx6Q8C7R7 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.82■□□□□ 0.44
Rfx6Q8C7R7 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rfx6Q8C7R7 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Rfx6Q8C7R7 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
Rfx6Q8C7R7 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Rfx6Q8C7R7 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC17.82■□□□□ 0.44
Rfx6Q8C7R7 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rfx6Q8C7R7 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.82■□□□□ 0.44
Rfx6Q8C7R7 Gm7291-201ENSMUST00000199147 382 ntBASIC17.82■□□□□ 0.44
Rfx6Q8C7R7 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rfx6Q8C7R7 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rfx6Q8C7R7 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.82■□□□□ 0.44
Rfx6Q8C7R7 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rfx6Q8C7R7 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rfx6Q8C7R7 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rfx6Q8C7R7 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rfx6Q8C7R7 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Rfx6Q8C7R7 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Rfx6Q8C7R7 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rfx6Q8C7R7 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rfx6Q8C7R7 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rfx6Q8C7R7 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rfx6Q8C7R7 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rfx6Q8C7R7 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rfx6Q8C7R7 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.81■□□□□ 0.44
Rfx6Q8C7R7 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rfx6Q8C7R7 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rfx6Q8C7R7 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rfx6Q8C7R7 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rfx6Q8C7R7 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rfx6Q8C7R7 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Rfx6Q8C7R7 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
Rfx6Q8C7R7 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.81■□□□□ 0.44
Rfx6Q8C7R7 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rfx6Q8C7R7 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rfx6Q8C7R7 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Rfx6Q8C7R7 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
Rfx6Q8C7R7 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rfx6Q8C7R7 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rfx6Q8C7R7 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rfx6Q8C7R7 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
Rfx6Q8C7R7 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Rfx6Q8C7R7 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rfx6Q8C7R7 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Rfx6Q8C7R7 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
Rfx6Q8C7R7 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rfx6Q8C7R7 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rfx6Q8C7R7 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Rfx6Q8C7R7 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rfx6Q8C7R7 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rfx6Q8C7R7 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rfx6Q8C7R7 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rfx6Q8C7R7 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfx6Q8C7R7 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfx6Q8C7R7 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfx6Q8C7R7 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.79■□□□□ 0.44
Rfx6Q8C7R7 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfx6Q8C7R7 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfx6Q8C7R7 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfx6Q8C7R7 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfx6Q8C7R7 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfx6Q8C7R7 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfx6Q8C7R7 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.79■□□□□ 0.44
Rfx6Q8C7R7 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rfx6Q8C7R7 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfx6Q8C7R7 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Rfx6Q8C7R7 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC17.79■□□□□ 0.44
Rfx6Q8C7R7 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms