Protein–RNA interactions for Protein: Q8C6M1

Usp20, Ubiquitin carboxyl-terminal hydrolase 20, mousemouse

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp20Q8C6M1 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp20Q8C6M1 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Usp20Q8C6M1 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Usp20Q8C6M1 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp20Q8C6M1 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC19.36■□□□□ 0.69
Usp20Q8C6M1 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp20Q8C6M1 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp20Q8C6M1 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Usp20Q8C6M1 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC19.36■□□□□ 0.69
Usp20Q8C6M1 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Usp20Q8C6M1 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Usp20Q8C6M1 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Usp20Q8C6M1 Mir5130-201ENSMUST00000175160 84 ntBASIC19.36■□□□□ 0.69
Usp20Q8C6M1 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Usp20Q8C6M1 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp20Q8C6M1 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC19.36■□□□□ 0.69
Usp20Q8C6M1 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp20Q8C6M1 Gm7367-201ENSMUST00000057611 492 ntBASIC19.36■□□□□ 0.69
Usp20Q8C6M1 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp20Q8C6M1 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp20Q8C6M1 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC19.36■□□□□ 0.69
Usp20Q8C6M1 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp20Q8C6M1 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Usp20Q8C6M1 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp20Q8C6M1 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
Usp20Q8C6M1 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp20Q8C6M1 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Usp20Q8C6M1 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp20Q8C6M1 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Usp20Q8C6M1 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
Usp20Q8C6M1 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Usp20Q8C6M1 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Usp20Q8C6M1 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp20Q8C6M1 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC19.35■□□□□ 0.69
Usp20Q8C6M1 Gm23634-201ENSMUST00000175071 91 ntBASIC19.35■□□□□ 0.69
Usp20Q8C6M1 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
Usp20Q8C6M1 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp20Q8C6M1 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp20Q8C6M1 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Usp20Q8C6M1 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Usp20Q8C6M1 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.34■□□□□ 0.69
Usp20Q8C6M1 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Usp20Q8C6M1 Gm2274-201ENSMUST00000184539 609 ntBASIC19.34■□□□□ 0.69
Usp20Q8C6M1 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC19.34■□□□□ 0.69
Usp20Q8C6M1 Gm18032-201ENSMUST00000222541 538 ntBASIC19.34■□□□□ 0.69
Usp20Q8C6M1 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Usp20Q8C6M1 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Usp20Q8C6M1 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Usp20Q8C6M1 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Usp20Q8C6M1 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Usp20Q8C6M1 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC19.34■□□□□ 0.69
Usp20Q8C6M1 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Usp20Q8C6M1 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC19.33■□□□□ 0.69
Usp20Q8C6M1 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Usp20Q8C6M1 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Usp20Q8C6M1 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Usp20Q8C6M1 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Usp20Q8C6M1 Gm10459-201ENSMUST00000202708 1155 ntBASIC19.33■□□□□ 0.68
Usp20Q8C6M1 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Usp20Q8C6M1 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Usp20Q8C6M1 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Usp20Q8C6M1 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Usp20Q8C6M1 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC19.33■□□□□ 0.68
Usp20Q8C6M1 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Usp20Q8C6M1 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Usp20Q8C6M1 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp20Q8C6M1 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp20Q8C6M1 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Usp20Q8C6M1 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp20Q8C6M1 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Usp20Q8C6M1 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp20Q8C6M1 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Usp20Q8C6M1 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Usp20Q8C6M1 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp20Q8C6M1 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Usp20Q8C6M1 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp20Q8C6M1 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Usp20Q8C6M1 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp20Q8C6M1 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp20Q8C6M1 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
Usp20Q8C6M1 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp20Q8C6M1 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp20Q8C6M1 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp20Q8C6M1 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp20Q8C6M1 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Usp20Q8C6M1 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Usp20Q8C6M1 Gm37811-201ENSMUST00000192416 2601 ntBASIC19.31■□□□□ 0.68
Usp20Q8C6M1 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Usp20Q8C6M1 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Usp20Q8C6M1 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Usp20Q8C6M1 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Usp20Q8C6M1 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Usp20Q8C6M1 Gm10013-201ENSMUST00000106074 672 ntBASIC19.31■□□□□ 0.68
Usp20Q8C6M1 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Usp20Q8C6M1 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC19.31■□□□□ 0.68
Usp20Q8C6M1 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
Usp20Q8C6M1 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Usp20Q8C6M1 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Usp20Q8C6M1 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Usp20Q8C6M1 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms