Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Usp44Q8C2S0 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Usp44Q8C2S0 Gm715-201ENSMUST00000117865 831 ntBASIC20.54■□□□□ 0.88
Usp44Q8C2S0 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC20.54■□□□□ 0.88
Usp44Q8C2S0 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC20.54■□□□□ 0.88
Usp44Q8C2S0 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Usp44Q8C2S0 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Usp44Q8C2S0 Gm9694-201ENSMUST00000193347 1189 ntBASIC20.54■□□□□ 0.88
Usp44Q8C2S0 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Usp44Q8C2S0 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Usp44Q8C2S0 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp44Q8C2S0 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp44Q8C2S0 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC20.53■□□□□ 0.88
Usp44Q8C2S0 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC20.53■□□□□ 0.88
Usp44Q8C2S0 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC20.53■□□□□ 0.88
Usp44Q8C2S0 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC20.53■□□□□ 0.88
Usp44Q8C2S0 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Usp44Q8C2S0 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp44Q8C2S0 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC20.53■□□□□ 0.88
Usp44Q8C2S0 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp44Q8C2S0 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.88
Usp44Q8C2S0 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Usp44Q8C2S0 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Usp44Q8C2S0 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Usp44Q8C2S0 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
Usp44Q8C2S0 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Usp44Q8C2S0 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Usp44Q8C2S0 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC20.52■□□□□ 0.88
Usp44Q8C2S0 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC20.52■□□□□ 0.88
Usp44Q8C2S0 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Usp44Q8C2S0 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Usp44Q8C2S0 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC20.52■□□□□ 0.87
Usp44Q8C2S0 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Usp44Q8C2S0 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Usp44Q8C2S0 Gm13181-201ENSMUST00000120117 1069 ntBASIC20.51■□□□□ 0.87
Usp44Q8C2S0 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC20.51■□□□□ 0.87
Usp44Q8C2S0 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
Usp44Q8C2S0 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC20.51■□□□□ 0.87
Usp44Q8C2S0 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC20.51■□□□□ 0.87
Usp44Q8C2S0 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Usp44Q8C2S0 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Usp44Q8C2S0 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Usp44Q8C2S0 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC20.51■□□□□ 0.87
Usp44Q8C2S0 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Usp44Q8C2S0 Gm42900-201ENSMUST00000197184 2167 ntBASIC20.51■□□□□ 0.87
Usp44Q8C2S0 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Usp44Q8C2S0 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Usp44Q8C2S0 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC20.5■□□□□ 0.87
Usp44Q8C2S0 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
Usp44Q8C2S0 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Usp44Q8C2S0 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC20.5■□□□□ 0.87
Usp44Q8C2S0 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Usp44Q8C2S0 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC20.5■□□□□ 0.87
Usp44Q8C2S0 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Usp44Q8C2S0 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Usp44Q8C2S0 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Usp44Q8C2S0 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Usp44Q8C2S0 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Usp44Q8C2S0 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Usp44Q8C2S0 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Usp44Q8C2S0 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Usp44Q8C2S0 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Usp44Q8C2S0 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Usp44Q8C2S0 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Usp44Q8C2S0 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Usp44Q8C2S0 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Usp44Q8C2S0 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Usp44Q8C2S0 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Usp44Q8C2S0 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Usp44Q8C2S0 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
Usp44Q8C2S0 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Usp44Q8C2S0 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Usp44Q8C2S0 Gm6598-201ENSMUST00000202719 2615 ntBASIC20.48■□□□□ 0.87
Usp44Q8C2S0 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Usp44Q8C2S0 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Usp44Q8C2S0 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Usp44Q8C2S0 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Usp44Q8C2S0 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC20.48■□□□□ 0.87
Usp44Q8C2S0 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Usp44Q8C2S0 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Usp44Q8C2S0 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Usp44Q8C2S0 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Usp44Q8C2S0 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Usp44Q8C2S0 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Usp44Q8C2S0 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Usp44Q8C2S0 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC20.47■□□□□ 0.87
Usp44Q8C2S0 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Usp44Q8C2S0 Gm12085-201ENSMUST00000119263 940 ntBASIC20.47■□□□□ 0.87
Usp44Q8C2S0 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Usp44Q8C2S0 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Usp44Q8C2S0 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Usp44Q8C2S0 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Usp44Q8C2S0 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Usp44Q8C2S0 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Usp44Q8C2S0 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Usp44Q8C2S0 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Usp44Q8C2S0 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Usp44Q8C2S0 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Usp44Q8C2S0 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Usp44Q8C2S0 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms