Protein–RNA interactions for Protein: Q8C263

Ska3, Spindle and kinetochore-associated protein 3, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska3Q8C263 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC16.48■□□□□ 0.23
Ska3Q8C263 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
Ska3Q8C263 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ska3Q8C263 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ska3Q8C263 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ska3Q8C263 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ska3Q8C263 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ska3Q8C263 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.47■□□□□ 0.23
Ska3Q8C263 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ska3Q8C263 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ska3Q8C263 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ska3Q8C263 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ska3Q8C263 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ska3Q8C263 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC16.47■□□□□ 0.23
Ska3Q8C263 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ska3Q8C263 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ska3Q8C263 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ska3Q8C263 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ska3Q8C263 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ska3Q8C263 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Ska3Q8C263 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ska3Q8C263 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ska3Q8C263 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ska3Q8C263 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ska3Q8C263 Idnk-204ENSMUST00000226010 1898 ntBASIC16.46■□□□□ 0.23
Ska3Q8C263 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ska3Q8C263 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ska3Q8C263 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.46■□□□□ 0.23
Ska3Q8C263 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
Ska3Q8C263 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ska3Q8C263 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC16.46■□□□□ 0.23
Ska3Q8C263 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC16.46■□□□□ 0.23
Ska3Q8C263 Gm12382-201ENSMUST00000122005 922 ntBASIC16.46■□□□□ 0.23
Ska3Q8C263 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ska3Q8C263 Gm37292-201ENSMUST00000192062 758 ntBASIC16.46■□□□□ 0.23
Ska3Q8C263 Gm10812-201ENSMUST00000099864 546 ntBASIC16.46■□□□□ 0.23
Ska3Q8C263 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ska3Q8C263 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.46■□□□□ 0.23
Ska3Q8C263 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ska3Q8C263 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Ska3Q8C263 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
Ska3Q8C263 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Ska3Q8C263 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Ska3Q8C263 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Ska3Q8C263 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC16.45■□□□□ 0.22
Ska3Q8C263 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ska3Q8C263 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ska3Q8C263 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ska3Q8C263 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.45■□□□□ 0.22
Ska3Q8C263 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ska3Q8C263 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ska3Q8C263 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ska3Q8C263 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
Ska3Q8C263 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Ska3Q8C263 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ska3Q8C263 Gm43183-201ENSMUST00000200632 547 ntBASIC16.45■□□□□ 0.22
Ska3Q8C263 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC16.45■□□□□ 0.22
Ska3Q8C263 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ska3Q8C263 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ska3Q8C263 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ska3Q8C263 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ska3Q8C263 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Ska3Q8C263 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ska3Q8C263 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.45■□□□□ 0.22
Ska3Q8C263 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ska3Q8C263 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Ska3Q8C263 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ska3Q8C263 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ska3Q8C263 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ska3Q8C263 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ska3Q8C263 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ska3Q8C263 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ska3Q8C263 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ska3Q8C263 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC16.44■□□□□ 0.22
Ska3Q8C263 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC16.44■□□□□ 0.22
Ska3Q8C263 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ska3Q8C263 Gm37820-201ENSMUST00000194021 2147 ntBASIC16.44■□□□□ 0.22
Ska3Q8C263 AC154649.1-201ENSMUST00000227392 384 ntBASIC16.44■□□□□ 0.22
Ska3Q8C263 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ska3Q8C263 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ska3Q8C263 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ska3Q8C263 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ska3Q8C263 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.44■□□□□ 0.22
Ska3Q8C263 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ska3Q8C263 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.43■□□□□ 0.22
Ska3Q8C263 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ska3Q8C263 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.43■□□□□ 0.22
Ska3Q8C263 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ska3Q8C263 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ska3Q8C263 AC124581.1-201ENSMUST00000225416 1399 ntBASIC16.43■□□□□ 0.22
Ska3Q8C263 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.43■□□□□ 0.22
Ska3Q8C263 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ska3Q8C263 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Ska3Q8C263 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ska3Q8C263 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ska3Q8C263 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC16.43■□□□□ 0.22
Ska3Q8C263 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ska3Q8C263 Gm6576-201ENSMUST00000169678 883 ntBASIC16.43■□□□□ 0.22
Ska3Q8C263 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ska3Q8C263 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms