Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sh3rf3Q8C120 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sh3rf3Q8C120 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sh3rf3Q8C120 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sh3rf3Q8C120 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sh3rf3Q8C120 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sh3rf3Q8C120 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sh3rf3Q8C120 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.25■□□□□ 0.51
Sh3rf3Q8C120 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Sh3rf3Q8C120 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Sh3rf3Q8C120 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sh3rf3Q8C120 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sh3rf3Q8C120 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sh3rf3Q8C120 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sh3rf3Q8C120 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sh3rf3Q8C120 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Sh3rf3Q8C120 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18.25■□□□□ 0.51
Sh3rf3Q8C120 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Sh3rf3Q8C120 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.25■□□□□ 0.51
Sh3rf3Q8C120 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.25■□□□□ 0.51
Sh3rf3Q8C120 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.25■□□□□ 0.51
Sh3rf3Q8C120 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Sh3rf3Q8C120 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Sh3rf3Q8C120 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Sh3rf3Q8C120 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sh3rf3Q8C120 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sh3rf3Q8C120 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sh3rf3Q8C120 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sh3rf3Q8C120 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sh3rf3Q8C120 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sh3rf3Q8C120 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sh3rf3Q8C120 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sh3rf3Q8C120 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sh3rf3Q8C120 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.24■□□□□ 0.51
Sh3rf3Q8C120 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sh3rf3Q8C120 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sh3rf3Q8C120 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
Sh3rf3Q8C120 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sh3rf3Q8C120 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sh3rf3Q8C120 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Sh3rf3Q8C120 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Sh3rf3Q8C120 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Sh3rf3Q8C120 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sh3rf3Q8C120 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sh3rf3Q8C120 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC18.24■□□□□ 0.51
Sh3rf3Q8C120 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sh3rf3Q8C120 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sh3rf3Q8C120 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sh3rf3Q8C120 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sh3rf3Q8C120 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sh3rf3Q8C120 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sh3rf3Q8C120 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sh3rf3Q8C120 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.23■□□□□ 0.51
Sh3rf3Q8C120 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sh3rf3Q8C120 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC18.23■□□□□ 0.51
Sh3rf3Q8C120 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sh3rf3Q8C120 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Sh3rf3Q8C120 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Sh3rf3Q8C120 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sh3rf3Q8C120 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sh3rf3Q8C120 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sh3rf3Q8C120 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Sh3rf3Q8C120 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sh3rf3Q8C120 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sh3rf3Q8C120 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sh3rf3Q8C120 Gm45244-201ENSMUST00000211328 2200 ntBASIC18.22■□□□□ 0.51
Sh3rf3Q8C120 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sh3rf3Q8C120 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.22■□□□□ 0.51
Sh3rf3Q8C120 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sh3rf3Q8C120 Mir6349-201ENSMUST00000184059 97 ntBASIC18.22■□□□□ 0.51
Sh3rf3Q8C120 Gm42545-201ENSMUST00000202755 922 ntBASIC18.22■□□□□ 0.51
Sh3rf3Q8C120 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Sh3rf3Q8C120 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sh3rf3Q8C120 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sh3rf3Q8C120 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Sh3rf3Q8C120 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sh3rf3Q8C120 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sh3rf3Q8C120 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Sh3rf3Q8C120 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Sh3rf3Q8C120 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Sh3rf3Q8C120 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Sh3rf3Q8C120 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Sh3rf3Q8C120 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sh3rf3Q8C120 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Sh3rf3Q8C120 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sh3rf3Q8C120 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sh3rf3Q8C120 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Sh3rf3Q8C120 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sh3rf3Q8C120 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sh3rf3Q8C120 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Sh3rf3Q8C120 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sh3rf3Q8C120 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Sh3rf3Q8C120 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sh3rf3Q8C120 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sh3rf3Q8C120 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Sh3rf3Q8C120 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Sh3rf3Q8C120 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sh3rf3Q8C120 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.2■□□□□ 0.5
Sh3rf3Q8C120 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.2■□□□□ 0.5
Sh3rf3Q8C120 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms