Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sh3rf2Q8BZT2 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sh3rf2Q8BZT2 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sh3rf2Q8BZT2 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sh3rf2Q8BZT2 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sh3rf2Q8BZT2 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sh3rf2Q8BZT2 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.77■□□□□ 0.44
Sh3rf2Q8BZT2 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sh3rf2Q8BZT2 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Sh3rf2Q8BZT2 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sh3rf2Q8BZT2 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Sh3rf2Q8BZT2 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.77■□□□□ 0.44
Sh3rf2Q8BZT2 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.77■□□□□ 0.44
Sh3rf2Q8BZT2 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
Sh3rf2Q8BZT2 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sh3rf2Q8BZT2 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Sh3rf2Q8BZT2 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
Sh3rf2Q8BZT2 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Sh3rf2Q8BZT2 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
Sh3rf2Q8BZT2 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Sh3rf2Q8BZT2 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sh3rf2Q8BZT2 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sh3rf2Q8BZT2 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sh3rf2Q8BZT2 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sh3rf2Q8BZT2 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sh3rf2Q8BZT2 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sh3rf2Q8BZT2 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Sh3rf2Q8BZT2 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
Sh3rf2Q8BZT2 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC17.76■□□□□ 0.43
Sh3rf2Q8BZT2 Gm18032-201ENSMUST00000222541 538 ntBASIC17.76■□□□□ 0.43
Sh3rf2Q8BZT2 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sh3rf2Q8BZT2 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sh3rf2Q8BZT2 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Sh3rf2Q8BZT2 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
Sh3rf2Q8BZT2 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sh3rf2Q8BZT2 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sh3rf2Q8BZT2 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Sh3rf2Q8BZT2 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sh3rf2Q8BZT2 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Sh3rf2Q8BZT2 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sh3rf2Q8BZT2 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sh3rf2Q8BZT2 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sh3rf2Q8BZT2 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sh3rf2Q8BZT2 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sh3rf2Q8BZT2 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sh3rf2Q8BZT2 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Sh3rf2Q8BZT2 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sh3rf2Q8BZT2 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Sh3rf2Q8BZT2 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sh3rf2Q8BZT2 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sh3rf2Q8BZT2 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sh3rf2Q8BZT2 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sh3rf2Q8BZT2 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sh3rf2Q8BZT2 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sh3rf2Q8BZT2 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sh3rf2Q8BZT2 Gm10013-201ENSMUST00000106074 672 ntBASIC17.74■□□□□ 0.43
Sh3rf2Q8BZT2 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Sh3rf2Q8BZT2 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC17.74■□□□□ 0.43
Sh3rf2Q8BZT2 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC17.74■□□□□ 0.43
Sh3rf2Q8BZT2 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.74■□□□□ 0.43
Sh3rf2Q8BZT2 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.74■□□□□ 0.43
Sh3rf2Q8BZT2 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sh3rf2Q8BZT2 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Sh3rf2Q8BZT2 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC17.74■□□□□ 0.43
Sh3rf2Q8BZT2 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Sh3rf2Q8BZT2 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Sh3rf2Q8BZT2 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.74■□□□□ 0.43
Sh3rf2Q8BZT2 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sh3rf2Q8BZT2 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sh3rf2Q8BZT2 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sh3rf2Q8BZT2 Idnk-204ENSMUST00000226010 1898 ntBASIC17.73■□□□□ 0.43
Sh3rf2Q8BZT2 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sh3rf2Q8BZT2 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sh3rf2Q8BZT2 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Sh3rf2Q8BZT2 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sh3rf2Q8BZT2 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.73■□□□□ 0.43
Sh3rf2Q8BZT2 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Sh3rf2Q8BZT2 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sh3rf2Q8BZT2 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sh3rf2Q8BZT2 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sh3rf2Q8BZT2 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sh3rf2Q8BZT2 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sh3rf2Q8BZT2 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sh3rf2Q8BZT2 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Sh3rf2Q8BZT2 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Sh3rf2Q8BZT2 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Sh3rf2Q8BZT2 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sh3rf2Q8BZT2 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Sh3rf2Q8BZT2 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sh3rf2Q8BZT2 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sh3rf2Q8BZT2 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Sh3rf2Q8BZT2 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Sh3rf2Q8BZT2 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Sh3rf2Q8BZT2 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sh3rf2Q8BZT2 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Sh3rf2Q8BZT2 Gm37025-201ENSMUST00000195159 829 ntBASIC17.72■□□□□ 0.43
Sh3rf2Q8BZT2 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC17.72■□□□□ 0.43
Sh3rf2Q8BZT2 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Sh3rf2Q8BZT2 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC17.72■□□□□ 0.43
Sh3rf2Q8BZT2 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms