Protein–RNA interactions for Protein: Q8BSM7

Slc43a1, Large neutral amino acids transporter small subunit 3, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc43a1Q8BSM7 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Slc43a1Q8BSM7 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Slc43a1Q8BSM7 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Slc43a1Q8BSM7 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Slc43a1Q8BSM7 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Slc43a1Q8BSM7 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc43a1Q8BSM7 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc43a1Q8BSM7 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc43a1Q8BSM7 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc43a1Q8BSM7 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc43a1Q8BSM7 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc43a1Q8BSM7 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Slc43a1Q8BSM7 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc43a1Q8BSM7 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.69■□□□□ 0.42
Slc43a1Q8BSM7 Gm21362-201ENSMUST00000194272 928 ntBASIC17.69■□□□□ 0.42
Slc43a1Q8BSM7 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc43a1Q8BSM7 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc43a1Q8BSM7 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
Slc43a1Q8BSM7 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc43a1Q8BSM7 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc43a1Q8BSM7 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc43a1Q8BSM7 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Slc43a1Q8BSM7 Golph3-205ENSMUST00000228671 2842 ntBASIC17.69■□□□□ 0.42
Slc43a1Q8BSM7 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc43a1Q8BSM7 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc43a1Q8BSM7 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Slc43a1Q8BSM7 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc43a1Q8BSM7 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc43a1Q8BSM7 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Slc43a1Q8BSM7 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Slc43a1Q8BSM7 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Slc43a1Q8BSM7 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Slc43a1Q8BSM7 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Slc43a1Q8BSM7 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.68■□□□□ 0.42
Slc43a1Q8BSM7 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Slc43a1Q8BSM7 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Slc43a1Q8BSM7 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Slc43a1Q8BSM7 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Slc43a1Q8BSM7 AA414768-201ENSMUST00000121924 1257 ntBASIC17.68■□□□□ 0.42
Slc43a1Q8BSM7 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Slc43a1Q8BSM7 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.68■□□□□ 0.42
Slc43a1Q8BSM7 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Slc43a1Q8BSM7 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Slc43a1Q8BSM7 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Slc43a1Q8BSM7 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Slc43a1Q8BSM7 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Slc43a1Q8BSM7 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Slc43a1Q8BSM7 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Slc43a1Q8BSM7 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Slc43a1Q8BSM7 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Slc43a1Q8BSM7 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Slc43a1Q8BSM7 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Slc43a1Q8BSM7 Gm6728-201ENSMUST00000178117 1065 ntBASIC17.67■□□□□ 0.42
Slc43a1Q8BSM7 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC17.67■□□□□ 0.42
Slc43a1Q8BSM7 Gm9731-201ENSMUST00000209480 747 ntBASIC17.67■□□□□ 0.42
Slc43a1Q8BSM7 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Slc43a1Q8BSM7 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Slc43a1Q8BSM7 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Slc43a1Q8BSM7 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Slc43a1Q8BSM7 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Slc43a1Q8BSM7 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Slc43a1Q8BSM7 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Slc43a1Q8BSM7 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
Slc43a1Q8BSM7 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Slc43a1Q8BSM7 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Slc43a1Q8BSM7 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.66■□□□□ 0.42
Slc43a1Q8BSM7 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Slc43a1Q8BSM7 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Slc43a1Q8BSM7 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Slc43a1Q8BSM7 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Slc43a1Q8BSM7 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Slc43a1Q8BSM7 Gm7367-201ENSMUST00000057611 492 ntBASIC17.66■□□□□ 0.42
Slc43a1Q8BSM7 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Slc43a1Q8BSM7 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Slc43a1Q8BSM7 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Slc43a1Q8BSM7 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Slc43a1Q8BSM7 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Slc43a1Q8BSM7 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Slc43a1Q8BSM7 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Slc43a1Q8BSM7 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Slc43a1Q8BSM7 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Slc43a1Q8BSM7 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Slc43a1Q8BSM7 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Slc43a1Q8BSM7 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Slc43a1Q8BSM7 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Slc43a1Q8BSM7 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Slc43a1Q8BSM7 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Slc43a1Q8BSM7 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Slc43a1Q8BSM7 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Slc43a1Q8BSM7 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Slc43a1Q8BSM7 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Slc43a1Q8BSM7 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Slc43a1Q8BSM7 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Slc43a1Q8BSM7 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Slc43a1Q8BSM7 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Slc43a1Q8BSM7 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Slc43a1Q8BSM7 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Slc43a1Q8BSM7 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Slc43a1Q8BSM7 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Slc43a1Q8BSM7 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms