Protein–RNA interactions for Protein: Q8BRJ4

Ppp1r3e, Protein phosphatase 1 regulatory subunit 3E, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp1r3eQ8BRJ4 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ppp1r3eQ8BRJ4 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ppp1r3eQ8BRJ4 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Ppp1r3eQ8BRJ4 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ppp1r3eQ8BRJ4 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.42■□□□□ 0.22
Ppp1r3eQ8BRJ4 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ppp1r3eQ8BRJ4 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ppp1r3eQ8BRJ4 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ppp1r3eQ8BRJ4 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ppp1r3eQ8BRJ4 Gm13216-201ENSMUST00000117145 591 ntBASIC16.42■□□□□ 0.22
Ppp1r3eQ8BRJ4 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ppp1r3eQ8BRJ4 Gm38285-201ENSMUST00000192928 922 ntBASIC16.42■□□□□ 0.22
Ppp1r3eQ8BRJ4 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC16.42■□□□□ 0.22
Ppp1r3eQ8BRJ4 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC16.42■□□□□ 0.22
Ppp1r3eQ8BRJ4 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ppp1r3eQ8BRJ4 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ppp1r3eQ8BRJ4 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ppp1r3eQ8BRJ4 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC16.42■□□□□ 0.22
Ppp1r3eQ8BRJ4 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.42■□□□□ 0.22
Ppp1r3eQ8BRJ4 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ppp1r3eQ8BRJ4 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ppp1r3eQ8BRJ4 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ppp1r3eQ8BRJ4 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ppp1r3eQ8BRJ4 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ppp1r3eQ8BRJ4 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ppp1r3eQ8BRJ4 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ppp1r3eQ8BRJ4 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Ppp1r3eQ8BRJ4 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Ppp1r3eQ8BRJ4 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC16.41■□□□□ 0.22
Ppp1r3eQ8BRJ4 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC16.41■□□□□ 0.22
Ppp1r3eQ8BRJ4 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC16.41■□□□□ 0.22
Ppp1r3eQ8BRJ4 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ppp1r3eQ8BRJ4 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ppp1r3eQ8BRJ4 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Ppp1r3eQ8BRJ4 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ppp1r3eQ8BRJ4 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ppp1r3eQ8BRJ4 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ppp1r3eQ8BRJ4 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ppp1r3eQ8BRJ4 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ppp1r3eQ8BRJ4 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ppp1r3eQ8BRJ4 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ppp1r3eQ8BRJ4 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ppp1r3eQ8BRJ4 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ppp1r3eQ8BRJ4 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ppp1r3eQ8BRJ4 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC16.4■□□□□ 0.22
Ppp1r3eQ8BRJ4 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ppp1r3eQ8BRJ4 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ppp1r3eQ8BRJ4 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ppp1r3eQ8BRJ4 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ppp1r3eQ8BRJ4 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ppp1r3eQ8BRJ4 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ppp1r3eQ8BRJ4 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ppp1r3eQ8BRJ4 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Ppp1r3eQ8BRJ4 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ppp1r3eQ8BRJ4 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ppp1r3eQ8BRJ4 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ppp1r3eQ8BRJ4 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ppp1r3eQ8BRJ4 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ppp1r3eQ8BRJ4 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ppp1r3eQ8BRJ4 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ppp1r3eQ8BRJ4 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ppp1r3eQ8BRJ4 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Ppp1r3eQ8BRJ4 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC16.39■□□□□ 0.21
Ppp1r3eQ8BRJ4 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC16.39■□□□□ 0.21
Ppp1r3eQ8BRJ4 AC140264.2-202ENSMUST00000218746 817 ntBASIC16.39■□□□□ 0.21
Ppp1r3eQ8BRJ4 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ppp1r3eQ8BRJ4 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ppp1r3eQ8BRJ4 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ppp1r3eQ8BRJ4 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ppp1r3eQ8BRJ4 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ppp1r3eQ8BRJ4 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ppp1r3eQ8BRJ4 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ppp1r3eQ8BRJ4 Gm37820-201ENSMUST00000194021 2147 ntBASIC16.39■□□□□ 0.21
Ppp1r3eQ8BRJ4 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.39■□□□□ 0.21
Ppp1r3eQ8BRJ4 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ppp1r3eQ8BRJ4 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC16.38■□□□□ 0.21
Ppp1r3eQ8BRJ4 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ppp1r3eQ8BRJ4 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ppp1r3eQ8BRJ4 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ppp1r3eQ8BRJ4 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ppp1r3eQ8BRJ4 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ppp1r3eQ8BRJ4 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Ppp1r3eQ8BRJ4 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ppp1r3eQ8BRJ4 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ppp1r3eQ8BRJ4 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ppp1r3eQ8BRJ4 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ppp1r3eQ8BRJ4 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.38■□□□□ 0.21
Ppp1r3eQ8BRJ4 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ppp1r3eQ8BRJ4 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC16.38■□□□□ 0.21
Ppp1r3eQ8BRJ4 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ppp1r3eQ8BRJ4 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ppp1r3eQ8BRJ4 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Ppp1r3eQ8BRJ4 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ppp1r3eQ8BRJ4 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ppp1r3eQ8BRJ4 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ppp1r3eQ8BRJ4 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ppp1r3eQ8BRJ4 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ppp1r3eQ8BRJ4 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.37■□□□□ 0.21
Ppp1r3eQ8BRJ4 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ppp1r3eQ8BRJ4 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 11.4 ms