Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
Scfd1Q8BRF7 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC20.06■□□□□ 0.8
Scfd1Q8BRF7 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Scfd1Q8BRF7 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scfd1Q8BRF7 Gm17661-201ENSMUST00000170317 270 ntBASIC20.06■□□□□ 0.8
Scfd1Q8BRF7 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC20.06■□□□□ 0.8
Scfd1Q8BRF7 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scfd1Q8BRF7 Gm7370-201ENSMUST00000219471 767 ntBASIC20.06■□□□□ 0.8
Scfd1Q8BRF7 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scfd1Q8BRF7 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scfd1Q8BRF7 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scfd1Q8BRF7 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scfd1Q8BRF7 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Scfd1Q8BRF7 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Scfd1Q8BRF7 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Scfd1Q8BRF7 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Scfd1Q8BRF7 Gm23634-201ENSMUST00000175071 91 ntBASIC20.05■□□□□ 0.8
Scfd1Q8BRF7 Gm22697-201ENSMUST00000175194 63 ntBASIC20.05■□□□□ 0.8
Scfd1Q8BRF7 Gm18101-201ENSMUST00000215769 548 ntBASIC20.05■□□□□ 0.8
Scfd1Q8BRF7 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Scfd1Q8BRF7 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Scfd1Q8BRF7 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Scfd1Q8BRF7 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Scfd1Q8BRF7 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Scfd1Q8BRF7 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Scfd1Q8BRF7 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Scfd1Q8BRF7 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Scfd1Q8BRF7 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Scfd1Q8BRF7 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Scfd1Q8BRF7 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC20.04■□□□□ 0.8
Scfd1Q8BRF7 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Scfd1Q8BRF7 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC20.04■□□□□ 0.8
Scfd1Q8BRF7 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Scfd1Q8BRF7 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Scfd1Q8BRF7 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
Scfd1Q8BRF7 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC20.04■□□□□ 0.8
Scfd1Q8BRF7 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Scfd1Q8BRF7 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Scfd1Q8BRF7 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Scfd1Q8BRF7 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC20.03■□□□□ 0.8
Scfd1Q8BRF7 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Scfd1Q8BRF7 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Scfd1Q8BRF7 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Scfd1Q8BRF7 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
Scfd1Q8BRF7 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Scfd1Q8BRF7 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Scfd1Q8BRF7 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Scfd1Q8BRF7 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Scfd1Q8BRF7 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Scfd1Q8BRF7 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Scfd1Q8BRF7 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Scfd1Q8BRF7 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Scfd1Q8BRF7 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Scfd1Q8BRF7 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Scfd1Q8BRF7 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Scfd1Q8BRF7 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
Scfd1Q8BRF7 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Scfd1Q8BRF7 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Scfd1Q8BRF7 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Scfd1Q8BRF7 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Scfd1Q8BRF7 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Scfd1Q8BRF7 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Scfd1Q8BRF7 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Scfd1Q8BRF7 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Scfd1Q8BRF7 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Scfd1Q8BRF7 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Scfd1Q8BRF7 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Scfd1Q8BRF7 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
Scfd1Q8BRF7 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Scfd1Q8BRF7 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Scfd1Q8BRF7 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC20.01■□□□□ 0.79
Scfd1Q8BRF7 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Scfd1Q8BRF7 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Scfd1Q8BRF7 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Scfd1Q8BRF7 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
Scfd1Q8BRF7 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Scfd1Q8BRF7 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Scfd1Q8BRF7 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC20■□□□□ 0.79
Scfd1Q8BRF7 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Scfd1Q8BRF7 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC20■□□□□ 0.79
Scfd1Q8BRF7 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Scfd1Q8BRF7 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Scfd1Q8BRF7 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC20■□□□□ 0.79
Scfd1Q8BRF7 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC20■□□□□ 0.79
Scfd1Q8BRF7 Gm6728-201ENSMUST00000178117 1065 ntBASIC20■□□□□ 0.79
Scfd1Q8BRF7 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Scfd1Q8BRF7 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC20■□□□□ 0.79
Scfd1Q8BRF7 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Scfd1Q8BRF7 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC20■□□□□ 0.79
Scfd1Q8BRF7 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
Scfd1Q8BRF7 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC20■□□□□ 0.79
Scfd1Q8BRF7 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scfd1Q8BRF7 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scfd1Q8BRF7 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
Scfd1Q8BRF7 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scfd1Q8BRF7 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scfd1Q8BRF7 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scfd1Q8BRF7 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scfd1Q8BRF7 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scfd1Q8BRF7 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms