Protein–RNA interactions for Protein: Q8BR65

Suds3, Sin3 histone deacetylase corepressor complex component SDS3, mousemouse

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Suds3Q8BR65 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Suds3Q8BR65 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Suds3Q8BR65 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.98■□□□□ 0.47
Suds3Q8BR65 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Suds3Q8BR65 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Suds3Q8BR65 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Suds3Q8BR65 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Suds3Q8BR65 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Suds3Q8BR65 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC17.98■□□□□ 0.47
Suds3Q8BR65 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Suds3Q8BR65 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Suds3Q8BR65 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Suds3Q8BR65 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Suds3Q8BR65 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Suds3Q8BR65 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
Suds3Q8BR65 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Suds3Q8BR65 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.97■□□□□ 0.47
Suds3Q8BR65 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Suds3Q8BR65 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Suds3Q8BR65 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.97■□□□□ 0.47
Suds3Q8BR65 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Suds3Q8BR65 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Suds3Q8BR65 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Suds3Q8BR65 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Suds3Q8BR65 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Suds3Q8BR65 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Suds3Q8BR65 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Suds3Q8BR65 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Suds3Q8BR65 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Suds3Q8BR65 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Suds3Q8BR65 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Suds3Q8BR65 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Suds3Q8BR65 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.96■□□□□ 0.47
Suds3Q8BR65 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Suds3Q8BR65 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Suds3Q8BR65 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Suds3Q8BR65 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Suds3Q8BR65 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Suds3Q8BR65 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.96■□□□□ 0.47
Suds3Q8BR65 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Suds3Q8BR65 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Suds3Q8BR65 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.96■□□□□ 0.47
Suds3Q8BR65 Gm44549-201ENSMUST00000208351 577 ntBASIC17.96■□□□□ 0.47
Suds3Q8BR65 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.96■□□□□ 0.47
Suds3Q8BR65 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Suds3Q8BR65 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Suds3Q8BR65 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Suds3Q8BR65 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Suds3Q8BR65 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.96■□□□□ 0.47
Suds3Q8BR65 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.46
Suds3Q8BR65 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Suds3Q8BR65 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Suds3Q8BR65 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Suds3Q8BR65 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Suds3Q8BR65 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Suds3Q8BR65 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Suds3Q8BR65 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Suds3Q8BR65 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Suds3Q8BR65 Gm8520-201ENSMUST00000186517 868 ntBASIC17.95■□□□□ 0.46
Suds3Q8BR65 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Suds3Q8BR65 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Suds3Q8BR65 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Suds3Q8BR65 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Suds3Q8BR65 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
Suds3Q8BR65 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.95■□□□□ 0.46
Suds3Q8BR65 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Suds3Q8BR65 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Suds3Q8BR65 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Suds3Q8BR65 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Suds3Q8BR65 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Suds3Q8BR65 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Suds3Q8BR65 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Suds3Q8BR65 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Suds3Q8BR65 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.94■□□□□ 0.46
Suds3Q8BR65 Gm2399-201ENSMUST00000104944 225 ntBASIC17.94■□□□□ 0.46
Suds3Q8BR65 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Suds3Q8BR65 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.94■□□□□ 0.46
Suds3Q8BR65 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.94■□□□□ 0.46
Suds3Q8BR65 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Suds3Q8BR65 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Suds3Q8BR65 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.94■□□□□ 0.46
Suds3Q8BR65 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.94■□□□□ 0.46
Suds3Q8BR65 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Suds3Q8BR65 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Suds3Q8BR65 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Suds3Q8BR65 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Suds3Q8BR65 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.93■□□□□ 0.46
Suds3Q8BR65 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Suds3Q8BR65 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Suds3Q8BR65 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Suds3Q8BR65 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Suds3Q8BR65 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Suds3Q8BR65 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Suds3Q8BR65 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Suds3Q8BR65 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Suds3Q8BR65 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Suds3Q8BR65 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Suds3Q8BR65 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Suds3Q8BR65 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Suds3Q8BR65 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms