Protein–RNA interactions for Protein: Q8BMK4

Ckap4, Cytoskeleton-associated protein 4, mousemouse

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4Q8BMK4 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ckap4Q8BMK4 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ckap4Q8BMK4 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Ckap4Q8BMK4 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ckap4Q8BMK4 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ckap4Q8BMK4 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Ckap4Q8BMK4 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ckap4Q8BMK4 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ckap4Q8BMK4 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Ckap4Q8BMK4 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Ckap4Q8BMK4 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.61■□□□□ 0.25
Ckap4Q8BMK4 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ckap4Q8BMK4 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ckap4Q8BMK4 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Ckap4Q8BMK4 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ckap4Q8BMK4 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ckap4Q8BMK4 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Ckap4Q8BMK4 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ckap4Q8BMK4 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ckap4Q8BMK4 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
Ckap4Q8BMK4 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ckap4Q8BMK4 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ckap4Q8BMK4 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ckap4Q8BMK4 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Ckap4Q8BMK4 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ckap4Q8BMK4 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC16.6■□□□□ 0.25
Ckap4Q8BMK4 Mir5133-201ENSMUST00000174955 77 ntBASIC16.6■□□□□ 0.25
Ckap4Q8BMK4 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC16.6■□□□□ 0.25
Ckap4Q8BMK4 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Ckap4Q8BMK4 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ckap4Q8BMK4 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ckap4Q8BMK4 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ckap4Q8BMK4 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ckap4Q8BMK4 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Ckap4Q8BMK4 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ckap4Q8BMK4 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ckap4Q8BMK4 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ckap4Q8BMK4 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Ckap4Q8BMK4 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ckap4Q8BMK4 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ckap4Q8BMK4 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ckap4Q8BMK4 Gm6211-202ENSMUST00000167849 925 ntBASIC16.59■□□□□ 0.25
Ckap4Q8BMK4 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ckap4Q8BMK4 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
Ckap4Q8BMK4 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ckap4Q8BMK4 Gm13509-201ENSMUST00000119733 1308 ntBASIC16.59■□□□□ 0.25
Ckap4Q8BMK4 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
Ckap4Q8BMK4 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ckap4Q8BMK4 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Ckap4Q8BMK4 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ckap4Q8BMK4 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ckap4Q8BMK4 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ckap4Q8BMK4 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ckap4Q8BMK4 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.59■□□□□ 0.25
Ckap4Q8BMK4 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ckap4Q8BMK4 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ckap4Q8BMK4 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ckap4Q8BMK4 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ckap4Q8BMK4 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ckap4Q8BMK4 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Ckap4Q8BMK4 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ckap4Q8BMK4 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ckap4Q8BMK4 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.58■□□□□ 0.24
Ckap4Q8BMK4 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC16.58■□□□□ 0.24
Ckap4Q8BMK4 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Ckap4Q8BMK4 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC16.58■□□□□ 0.24
Ckap4Q8BMK4 Gm12933-201ENSMUST00000120203 872 ntBASIC16.58■□□□□ 0.24
Ckap4Q8BMK4 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC16.58■□□□□ 0.24
Ckap4Q8BMK4 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Ckap4Q8BMK4 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC16.58■□□□□ 0.24
Ckap4Q8BMK4 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC16.58■□□□□ 0.24
Ckap4Q8BMK4 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Ckap4Q8BMK4 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ckap4Q8BMK4 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ckap4Q8BMK4 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ckap4Q8BMK4 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ckap4Q8BMK4 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Ckap4Q8BMK4 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ckap4Q8BMK4 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ckap4Q8BMK4 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ckap4Q8BMK4 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ckap4Q8BMK4 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ckap4Q8BMK4 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ckap4Q8BMK4 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ckap4Q8BMK4 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ckap4Q8BMK4 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ckap4Q8BMK4 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ckap4Q8BMK4 Tgds-204ENSMUST00000228543 1594 ntBASIC16.57■□□□□ 0.24
Ckap4Q8BMK4 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ckap4Q8BMK4 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC16.57■□□□□ 0.24
Ckap4Q8BMK4 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ckap4Q8BMK4 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ckap4Q8BMK4 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ckap4Q8BMK4 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.57■□□□□ 0.24
Ckap4Q8BMK4 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ckap4Q8BMK4 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ckap4Q8BMK4 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ckap4Q8BMK4 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Ckap4Q8BMK4 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
Ckap4Q8BMK4 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 10.4 ms