Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Col16a1Q8BLX7 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC23.1■■□□□ 1.29
Col16a1Q8BLX7 Gm45141-201ENSMUST00000206502 1888 ntBASIC23.1■■□□□ 1.29
Col16a1Q8BLX7 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Col16a1Q8BLX7 Gm19721-201ENSMUST00000195284 1764 ntBASIC23.1■■□□□ 1.29
Col16a1Q8BLX7 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
Col16a1Q8BLX7 Gm43272-201ENSMUST00000200599 1584 ntBASIC23.1■■□□□ 1.29
Col16a1Q8BLX7 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Col16a1Q8BLX7 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
Col16a1Q8BLX7 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Col16a1Q8BLX7 Gm15794-201ENSMUST00000120182 631 ntBASIC23.1■■□□□ 1.29
Col16a1Q8BLX7 Gm43514-201ENSMUST00000198852 424 ntBASIC23.1■■□□□ 1.29
Col16a1Q8BLX7 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Col16a1Q8BLX7 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC23.09■■□□□ 1.29
Col16a1Q8BLX7 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
Col16a1Q8BLX7 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Col16a1Q8BLX7 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Col16a1Q8BLX7 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Col16a1Q8BLX7 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Col16a1Q8BLX7 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Col16a1Q8BLX7 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Col16a1Q8BLX7 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Col16a1Q8BLX7 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Col16a1Q8BLX7 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
Col16a1Q8BLX7 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Col16a1Q8BLX7 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC23.08■■□□□ 1.29
Col16a1Q8BLX7 Gm45328-201ENSMUST00000210942 917 ntBASIC23.08■■□□□ 1.29
Col16a1Q8BLX7 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Col16a1Q8BLX7 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Col16a1Q8BLX7 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Col16a1Q8BLX7 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC23.08■■□□□ 1.28
Col16a1Q8BLX7 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC23.08■■□□□ 1.28
Col16a1Q8BLX7 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Col16a1Q8BLX7 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
Col16a1Q8BLX7 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Col16a1Q8BLX7 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Col16a1Q8BLX7 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Col16a1Q8BLX7 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Col16a1Q8BLX7 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Col16a1Q8BLX7 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Col16a1Q8BLX7 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Col16a1Q8BLX7 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Col16a1Q8BLX7 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Col16a1Q8BLX7 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Col16a1Q8BLX7 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Col16a1Q8BLX7 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Col16a1Q8BLX7 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
Col16a1Q8BLX7 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Col16a1Q8BLX7 AC154855.1-201ENSMUST00000227353 1458 ntBASIC23.06■■□□□ 1.28
Col16a1Q8BLX7 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Col16a1Q8BLX7 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Col16a1Q8BLX7 Gm27459-201ENSMUST00000184860 107 ntBASIC23.06■■□□□ 1.28
Col16a1Q8BLX7 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Col16a1Q8BLX7 Cxcl14-202ENSMUST00000224801 1467 ntBASIC23.05■■□□□ 1.28
Col16a1Q8BLX7 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Col16a1Q8BLX7 Gm25925-201ENSMUST00000158314 306 ntBASIC23.05■■□□□ 1.28
Col16a1Q8BLX7 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC23.05■■□□□ 1.28
Col16a1Q8BLX7 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
Col16a1Q8BLX7 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
Col16a1Q8BLX7 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Col16a1Q8BLX7 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Col16a1Q8BLX7 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Col16a1Q8BLX7 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
Col16a1Q8BLX7 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Col16a1Q8BLX7 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Col16a1Q8BLX7 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
Col16a1Q8BLX7 Gm13884-201ENSMUST00000118103 829 ntBASIC23.04■■□□□ 1.28
Col16a1Q8BLX7 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Col16a1Q8BLX7 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Col16a1Q8BLX7 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Col16a1Q8BLX7 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
Col16a1Q8BLX7 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
Col16a1Q8BLX7 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Col16a1Q8BLX7 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Col16a1Q8BLX7 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Col16a1Q8BLX7 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
Col16a1Q8BLX7 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Col16a1Q8BLX7 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Col16a1Q8BLX7 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Col16a1Q8BLX7 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Col16a1Q8BLX7 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Col16a1Q8BLX7 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Col16a1Q8BLX7 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Col16a1Q8BLX7 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC23.03■■□□□ 1.28
Col16a1Q8BLX7 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
Col16a1Q8BLX7 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Col16a1Q8BLX7 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Col16a1Q8BLX7 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Col16a1Q8BLX7 Ighv6-1-201ENSMUST00000193612 343 ntBASIC23.03■■□□□ 1.28
Col16a1Q8BLX7 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Col16a1Q8BLX7 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC23.03■■□□□ 1.28
Col16a1Q8BLX7 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
Col16a1Q8BLX7 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Col16a1Q8BLX7 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Col16a1Q8BLX7 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC23.02■■□□□ 1.28
Col16a1Q8BLX7 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
Col16a1Q8BLX7 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC23.02■■□□□ 1.28
Col16a1Q8BLX7 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Col16a1Q8BLX7 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Col16a1Q8BLX7 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC23.02■■□□□ 1.28
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms