Protein–RNA interactions for Protein: Q8BK35

Nop53, Ribosome biogenesis protein NOP53, mousemouse

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop53Q8BK35 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.79■□□□□ 0.6
Nop53Q8BK35 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nop53Q8BK35 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Nop53Q8BK35 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Nop53Q8BK35 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nop53Q8BK35 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nop53Q8BK35 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nop53Q8BK35 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nop53Q8BK35 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nop53Q8BK35 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nop53Q8BK35 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18.79■□□□□ 0.6
Nop53Q8BK35 Gm12441-201ENSMUST00000121806 588 ntBASIC18.79■□□□□ 0.6
Nop53Q8BK35 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nop53Q8BK35 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nop53Q8BK35 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nop53Q8BK35 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Nop53Q8BK35 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Nop53Q8BK35 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nop53Q8BK35 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nop53Q8BK35 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nop53Q8BK35 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC18.78■□□□□ 0.6
Nop53Q8BK35 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Nop53Q8BK35 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Nop53Q8BK35 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.78■□□□□ 0.6
Nop53Q8BK35 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nop53Q8BK35 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nop53Q8BK35 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nop53Q8BK35 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nop53Q8BK35 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.78■□□□□ 0.6
Nop53Q8BK35 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC18.78■□□□□ 0.6
Nop53Q8BK35 Gm13148-201ENSMUST00000118892 745 ntBASIC18.78■□□□□ 0.6
Nop53Q8BK35 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nop53Q8BK35 Gm4968-201ENSMUST00000071458 858 ntBASIC18.78■□□□□ 0.6
Nop53Q8BK35 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nop53Q8BK35 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nop53Q8BK35 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nop53Q8BK35 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nop53Q8BK35 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.78■□□□□ 0.6
Nop53Q8BK35 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
Nop53Q8BK35 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.77■□□□□ 0.6
Nop53Q8BK35 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nop53Q8BK35 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Nop53Q8BK35 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nop53Q8BK35 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nop53Q8BK35 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
Nop53Q8BK35 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Nop53Q8BK35 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.77■□□□□ 0.6
Nop53Q8BK35 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Nop53Q8BK35 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nop53Q8BK35 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nop53Q8BK35 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nop53Q8BK35 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nop53Q8BK35 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nop53Q8BK35 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Nop53Q8BK35 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Nop53Q8BK35 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Nop53Q8BK35 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Nop53Q8BK35 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Nop53Q8BK35 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nop53Q8BK35 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nop53Q8BK35 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nop53Q8BK35 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nop53Q8BK35 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nop53Q8BK35 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nop53Q8BK35 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
Nop53Q8BK35 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.76■□□□□ 0.59
Nop53Q8BK35 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC18.76■□□□□ 0.59
Nop53Q8BK35 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.76■□□□□ 0.59
Nop53Q8BK35 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nop53Q8BK35 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nop53Q8BK35 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Nop53Q8BK35 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nop53Q8BK35 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nop53Q8BK35 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nop53Q8BK35 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nop53Q8BK35 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nop53Q8BK35 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Nop53Q8BK35 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nop53Q8BK35 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Nop53Q8BK35 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nop53Q8BK35 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nop53Q8BK35 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nop53Q8BK35 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nop53Q8BK35 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nop53Q8BK35 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Nop53Q8BK35 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nop53Q8BK35 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
Nop53Q8BK35 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Nop53Q8BK35 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Nop53Q8BK35 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nop53Q8BK35 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nop53Q8BK35 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Nop53Q8BK35 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC18.75■□□□□ 0.59
Nop53Q8BK35 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nop53Q8BK35 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nop53Q8BK35 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Nop53Q8BK35 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nop53Q8BK35 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nop53Q8BK35 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nop53Q8BK35 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms