Protein–RNA interactions for Protein: Q8BI41

Synb, Syncytin-B, mousemouse

Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynbQ8BI41 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
SynbQ8BI41 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SynbQ8BI41 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC16.7■□□□□ 0.26
SynbQ8BI41 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC16.7■□□□□ 0.26
SynbQ8BI41 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SynbQ8BI41 Gm38285-201ENSMUST00000192928 922 ntBASIC16.7■□□□□ 0.26
SynbQ8BI41 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC16.7■□□□□ 0.26
SynbQ8BI41 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SynbQ8BI41 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SynbQ8BI41 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SynbQ8BI41 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
SynbQ8BI41 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SynbQ8BI41 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SynbQ8BI41 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SynbQ8BI41 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SynbQ8BI41 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SynbQ8BI41 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SynbQ8BI41 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SynbQ8BI41 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SynbQ8BI41 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SynbQ8BI41 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SynbQ8BI41 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SynbQ8BI41 Gm42545-201ENSMUST00000202755 922 ntBASIC16.69■□□□□ 0.26
SynbQ8BI41 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC16.69■□□□□ 0.26
SynbQ8BI41 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC16.69■□□□□ 0.26
SynbQ8BI41 Timm23-208ENSMUST00000226683 750 ntBASIC16.69■□□□□ 0.26
SynbQ8BI41 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SynbQ8BI41 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
SynbQ8BI41 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SynbQ8BI41 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SynbQ8BI41 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SynbQ8BI41 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SynbQ8BI41 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
SynbQ8BI41 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SynbQ8BI41 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SynbQ8BI41 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SynbQ8BI41 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
SynbQ8BI41 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SynbQ8BI41 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
SynbQ8BI41 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SynbQ8BI41 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.68■□□□□ 0.26
SynbQ8BI41 Gm13559-201ENSMUST00000120476 863 ntBASIC16.68■□□□□ 0.26
SynbQ8BI41 Gm37292-201ENSMUST00000192062 758 ntBASIC16.68■□□□□ 0.26
SynbQ8BI41 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SynbQ8BI41 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.68■□□□□ 0.26
SynbQ8BI41 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SynbQ8BI41 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SynbQ8BI41 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SynbQ8BI41 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SynbQ8BI41 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SynbQ8BI41 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.68■□□□□ 0.26
SynbQ8BI41 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SynbQ8BI41 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC16.68■□□□□ 0.26
SynbQ8BI41 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SynbQ8BI41 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SynbQ8BI41 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SynbQ8BI41 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SynbQ8BI41 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SynbQ8BI41 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SynbQ8BI41 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SynbQ8BI41 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SynbQ8BI41 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SynbQ8BI41 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
SynbQ8BI41 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SynbQ8BI41 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SynbQ8BI41 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
SynbQ8BI41 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC16.67■□□□□ 0.26
SynbQ8BI41 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC16.67■□□□□ 0.26
SynbQ8BI41 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC16.67■□□□□ 0.26
SynbQ8BI41 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SynbQ8BI41 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
SynbQ8BI41 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SynbQ8BI41 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SynbQ8BI41 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SynbQ8BI41 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
SynbQ8BI41 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SynbQ8BI41 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SynbQ8BI41 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
SynbQ8BI41 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SynbQ8BI41 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SynbQ8BI41 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SynbQ8BI41 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SynbQ8BI41 Mir6349-201ENSMUST00000184059 97 ntBASIC16.66■□□□□ 0.26
SynbQ8BI41 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
SynbQ8BI41 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SynbQ8BI41 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SynbQ8BI41 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SynbQ8BI41 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.66■□□□□ 0.26
SynbQ8BI41 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SynbQ8BI41 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SynbQ8BI41 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SynbQ8BI41 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SynbQ8BI41 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SynbQ8BI41 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SynbQ8BI41 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SynbQ8BI41 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SynbQ8BI41 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SynbQ8BI41 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SynbQ8BI41 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SynbQ8BI41 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms