Protein–RNA interactions for Protein: Q8BGX0

Trim23, E3 ubiquitin-protein ligase TRIM23, mousemouse

Predictions only

Length 574 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23Q8BGX0 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim23Q8BGX0 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim23Q8BGX0 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trim23Q8BGX0 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim23Q8BGX0 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim23Q8BGX0 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim23Q8BGX0 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Trim23Q8BGX0 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim23Q8BGX0 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trim23Q8BGX0 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trim23Q8BGX0 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim23Q8BGX0 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Trim23Q8BGX0 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim23Q8BGX0 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trim23Q8BGX0 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim23Q8BGX0 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC16.9■□□□□ 0.3
Trim23Q8BGX0 Gm3375-201ENSMUST00000203929 796 ntBASIC16.9■□□□□ 0.3
Trim23Q8BGX0 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim23Q8BGX0 Arhgef4-208ENSMUST00000211073 171 ntBASIC16.9■□□□□ 0.3
Trim23Q8BGX0 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim23Q8BGX0 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim23Q8BGX0 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim23Q8BGX0 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim23Q8BGX0 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim23Q8BGX0 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Trim23Q8BGX0 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC16.9■□□□□ 0.3
Trim23Q8BGX0 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim23Q8BGX0 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
Trim23Q8BGX0 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim23Q8BGX0 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trim23Q8BGX0 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim23Q8BGX0 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trim23Q8BGX0 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Trim23Q8BGX0 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Trim23Q8BGX0 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim23Q8BGX0 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Trim23Q8BGX0 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim23Q8BGX0 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim23Q8BGX0 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.89■□□□□ 0.29
Trim23Q8BGX0 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Trim23Q8BGX0 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim23Q8BGX0 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trim23Q8BGX0 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trim23Q8BGX0 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Trim23Q8BGX0 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trim23Q8BGX0 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trim23Q8BGX0 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
Trim23Q8BGX0 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trim23Q8BGX0 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trim23Q8BGX0 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC16.89■□□□□ 0.29
Trim23Q8BGX0 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim23Q8BGX0 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim23Q8BGX0 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim23Q8BGX0 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trim23Q8BGX0 Gm43272-201ENSMUST00000200599 1584 ntBASIC16.89■□□□□ 0.29
Trim23Q8BGX0 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim23Q8BGX0 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim23Q8BGX0 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim23Q8BGX0 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trim23Q8BGX0 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim23Q8BGX0 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim23Q8BGX0 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Trim23Q8BGX0 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Trim23Q8BGX0 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trim23Q8BGX0 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim23Q8BGX0 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC16.88■□□□□ 0.29
Trim23Q8BGX0 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC16.88■□□□□ 0.29
Trim23Q8BGX0 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.88■□□□□ 0.29
Trim23Q8BGX0 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim23Q8BGX0 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim23Q8BGX0 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim23Q8BGX0 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Trim23Q8BGX0 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim23Q8BGX0 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim23Q8BGX0 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim23Q8BGX0 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim23Q8BGX0 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim23Q8BGX0 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Trim23Q8BGX0 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim23Q8BGX0 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim23Q8BGX0 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trim23Q8BGX0 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Trim23Q8BGX0 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim23Q8BGX0 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim23Q8BGX0 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
Trim23Q8BGX0 Gm24841-201ENSMUST00000158676 357 ntBASIC16.87■□□□□ 0.29
Trim23Q8BGX0 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trim23Q8BGX0 Mir6982-201ENSMUST00000184354 68 ntBASIC16.87■□□□□ 0.29
Trim23Q8BGX0 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim23Q8BGX0 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trim23Q8BGX0 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Trim23Q8BGX0 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Trim23Q8BGX0 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim23Q8BGX0 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim23Q8BGX0 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim23Q8BGX0 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim23Q8BGX0 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC16.86■□□□□ 0.29
Trim23Q8BGX0 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC16.86■□□□□ 0.29
Trim23Q8BGX0 Gm38027-201ENSMUST00000192315 235 ntBASIC16.86■□□□□ 0.29
Trim23Q8BGX0 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms