Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Samm50Q8BGH2 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Samm50Q8BGH2 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Samm50Q8BGH2 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Samm50Q8BGH2 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Samm50Q8BGH2 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Samm50Q8BGH2 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC20.55■□□□□ 0.88
Samm50Q8BGH2 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Samm50Q8BGH2 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Samm50Q8BGH2 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Samm50Q8BGH2 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Samm50Q8BGH2 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Samm50Q8BGH2 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Samm50Q8BGH2 Gm27275-201ENSMUST00000184318 272 ntBASIC20.55■□□□□ 0.88
Samm50Q8BGH2 Gm8969-201ENSMUST00000199694 526 ntBASIC20.55■□□□□ 0.88
Samm50Q8BGH2 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Samm50Q8BGH2 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Samm50Q8BGH2 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Samm50Q8BGH2 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Samm50Q8BGH2 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Samm50Q8BGH2 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Samm50Q8BGH2 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Samm50Q8BGH2 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Samm50Q8BGH2 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Samm50Q8BGH2 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Samm50Q8BGH2 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Samm50Q8BGH2 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Samm50Q8BGH2 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Samm50Q8BGH2 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Samm50Q8BGH2 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Samm50Q8BGH2 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Samm50Q8BGH2 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Samm50Q8BGH2 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Samm50Q8BGH2 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Samm50Q8BGH2 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC20.53■□□□□ 0.88
Samm50Q8BGH2 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
Samm50Q8BGH2 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Samm50Q8BGH2 Gm2399-201ENSMUST00000104944 225 ntBASIC20.53■□□□□ 0.88
Samm50Q8BGH2 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC20.53■□□□□ 0.88
Samm50Q8BGH2 Gm22325-201ENSMUST00000158904 308 ntBASIC20.53■□□□□ 0.88
Samm50Q8BGH2 Gm44878-201ENSMUST00000205812 1295 ntBASIC20.53■□□□□ 0.88
Samm50Q8BGH2 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Samm50Q8BGH2 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Samm50Q8BGH2 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC20.53■□□□□ 0.88
Samm50Q8BGH2 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Samm50Q8BGH2 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Samm50Q8BGH2 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Samm50Q8BGH2 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Samm50Q8BGH2 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Samm50Q8BGH2 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Samm50Q8BGH2 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Samm50Q8BGH2 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Samm50Q8BGH2 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Samm50Q8BGH2 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Samm50Q8BGH2 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Samm50Q8BGH2 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC20.52■□□□□ 0.88
Samm50Q8BGH2 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC20.52■□□□□ 0.88
Samm50Q8BGH2 Gm8520-201ENSMUST00000186517 868 ntBASIC20.52■□□□□ 0.88
Samm50Q8BGH2 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC20.52■□□□□ 0.88
Samm50Q8BGH2 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Samm50Q8BGH2 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Samm50Q8BGH2 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC20.52■□□□□ 0.87
Samm50Q8BGH2 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Samm50Q8BGH2 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Samm50Q8BGH2 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Samm50Q8BGH2 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Samm50Q8BGH2 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Samm50Q8BGH2 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Samm50Q8BGH2 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Samm50Q8BGH2 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Samm50Q8BGH2 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Samm50Q8BGH2 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Samm50Q8BGH2 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC20.51■□□□□ 0.87
Samm50Q8BGH2 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Samm50Q8BGH2 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Samm50Q8BGH2 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC20.51■□□□□ 0.87
Samm50Q8BGH2 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Samm50Q8BGH2 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Samm50Q8BGH2 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC20.51■□□□□ 0.87
Samm50Q8BGH2 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Samm50Q8BGH2 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC20.51■□□□□ 0.87
Samm50Q8BGH2 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Samm50Q8BGH2 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Samm50Q8BGH2 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Samm50Q8BGH2 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Samm50Q8BGH2 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Samm50Q8BGH2 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Samm50Q8BGH2 Gm15847-201ENSMUST00000121417 1065 ntBASIC20.5■□□□□ 0.87
Samm50Q8BGH2 Gm13168-201ENSMUST00000121771 632 ntBASIC20.5■□□□□ 0.87
Samm50Q8BGH2 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Samm50Q8BGH2 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Samm50Q8BGH2 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Samm50Q8BGH2 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Samm50Q8BGH2 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Samm50Q8BGH2 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Samm50Q8BGH2 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Samm50Q8BGH2 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Samm50Q8BGH2 Dio3-201ENSMUST00000097228 1449 ntBASIC20.5■□□□□ 0.87
Samm50Q8BGH2 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Samm50Q8BGH2 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms