Protein–RNA interactions for Protein: Q8BGA5

Krr1, KRR1 small subunit processome component homolog, mousemouse

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krr1Q8BGA5 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Krr1Q8BGA5 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Krr1Q8BGA5 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Krr1Q8BGA5 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
Krr1Q8BGA5 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC16.59■□□□□ 0.25
Krr1Q8BGA5 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Krr1Q8BGA5 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Krr1Q8BGA5 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC16.59■□□□□ 0.25
Krr1Q8BGA5 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Krr1Q8BGA5 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Krr1Q8BGA5 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Krr1Q8BGA5 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Krr1Q8BGA5 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Krr1Q8BGA5 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC16.59■□□□□ 0.25
Krr1Q8BGA5 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Krr1Q8BGA5 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.59■□□□□ 0.25
Krr1Q8BGA5 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Krr1Q8BGA5 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Krr1Q8BGA5 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Krr1Q8BGA5 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Krr1Q8BGA5 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Krr1Q8BGA5 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Krr1Q8BGA5 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Krr1Q8BGA5 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Krr1Q8BGA5 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Krr1Q8BGA5 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Krr1Q8BGA5 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Krr1Q8BGA5 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC16.58■□□□□ 0.24
Krr1Q8BGA5 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC16.58■□□□□ 0.24
Krr1Q8BGA5 Gm42569-201ENSMUST00000200539 472 ntBASIC16.58■□□□□ 0.24
Krr1Q8BGA5 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Krr1Q8BGA5 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Krr1Q8BGA5 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Krr1Q8BGA5 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Krr1Q8BGA5 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Krr1Q8BGA5 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Krr1Q8BGA5 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Krr1Q8BGA5 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Krr1Q8BGA5 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Krr1Q8BGA5 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Krr1Q8BGA5 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Krr1Q8BGA5 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Krr1Q8BGA5 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Krr1Q8BGA5 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Krr1Q8BGA5 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Krr1Q8BGA5 Gm10849-201ENSMUST00000100397 618 ntBASIC16.57■□□□□ 0.24
Krr1Q8BGA5 Gm22325-201ENSMUST00000158904 308 ntBASIC16.57■□□□□ 0.24
Krr1Q8BGA5 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Krr1Q8BGA5 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Krr1Q8BGA5 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Krr1Q8BGA5 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Krr1Q8BGA5 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Krr1Q8BGA5 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
Krr1Q8BGA5 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Krr1Q8BGA5 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Krr1Q8BGA5 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Krr1Q8BGA5 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Krr1Q8BGA5 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Krr1Q8BGA5 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Krr1Q8BGA5 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Krr1Q8BGA5 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC16.56■□□□□ 0.24
Krr1Q8BGA5 Gm8495-201ENSMUST00000188740 694 ntBASIC16.56■□□□□ 0.24
Krr1Q8BGA5 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Krr1Q8BGA5 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Krr1Q8BGA5 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Krr1Q8BGA5 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Krr1Q8BGA5 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Krr1Q8BGA5 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Krr1Q8BGA5 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Krr1Q8BGA5 Haglr-201ENSMUST00000100000 2085 ntBASIC16.55■□□□□ 0.24
Krr1Q8BGA5 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.55■□□□□ 0.24
Krr1Q8BGA5 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Krr1Q8BGA5 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Krr1Q8BGA5 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC16.55■□□□□ 0.24
Krr1Q8BGA5 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC16.55■□□□□ 0.24
Krr1Q8BGA5 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Krr1Q8BGA5 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Krr1Q8BGA5 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC16.55■□□□□ 0.24
Krr1Q8BGA5 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC16.55■□□□□ 0.24
Krr1Q8BGA5 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Krr1Q8BGA5 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Krr1Q8BGA5 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Krr1Q8BGA5 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Krr1Q8BGA5 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Krr1Q8BGA5 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Krr1Q8BGA5 Gm9867-201ENSMUST00000192212 2647 ntBASIC16.55■□□□□ 0.24
Krr1Q8BGA5 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Krr1Q8BGA5 Tgds-204ENSMUST00000228543 1594 ntBASIC16.55■□□□□ 0.24
Krr1Q8BGA5 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Krr1Q8BGA5 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Krr1Q8BGA5 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Krr1Q8BGA5 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Krr1Q8BGA5 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Krr1Q8BGA5 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Krr1Q8BGA5 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Krr1Q8BGA5 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Krr1Q8BGA5 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Krr1Q8BGA5 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
Krr1Q8BGA5 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Krr1Q8BGA5 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms