Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Trnp1Q80ZI1 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trnp1Q80ZI1 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trnp1Q80ZI1 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Trnp1Q80ZI1 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC19.8■□□□□ 0.76
Trnp1Q80ZI1 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trnp1Q80ZI1 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Trnp1Q80ZI1 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Trnp1Q80ZI1 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trnp1Q80ZI1 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trnp1Q80ZI1 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Trnp1Q80ZI1 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trnp1Q80ZI1 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Trnp1Q80ZI1 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Trnp1Q80ZI1 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trnp1Q80ZI1 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trnp1Q80ZI1 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.8■□□□□ 0.76
Trnp1Q80ZI1 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trnp1Q80ZI1 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Trnp1Q80ZI1 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Trnp1Q80ZI1 AC154855.1-201ENSMUST00000227353 1458 ntBASIC19.79■□□□□ 0.76
Trnp1Q80ZI1 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trnp1Q80ZI1 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Trnp1Q80ZI1 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trnp1Q80ZI1 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trnp1Q80ZI1 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Trnp1Q80ZI1 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.79■□□□□ 0.76
Trnp1Q80ZI1 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC19.79■□□□□ 0.76
Trnp1Q80ZI1 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Trnp1Q80ZI1 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trnp1Q80ZI1 AC124569.2-201ENSMUST00000225998 818 ntBASIC19.79■□□□□ 0.76
Trnp1Q80ZI1 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trnp1Q80ZI1 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trnp1Q80ZI1 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
Trnp1Q80ZI1 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trnp1Q80ZI1 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Trnp1Q80ZI1 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.78■□□□□ 0.76
Trnp1Q80ZI1 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trnp1Q80ZI1 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Trnp1Q80ZI1 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.78■□□□□ 0.76
Trnp1Q80ZI1 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Trnp1Q80ZI1 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trnp1Q80ZI1 Gm12895-201ENSMUST00000122214 226 ntBASIC19.78■□□□□ 0.76
Trnp1Q80ZI1 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC19.78■□□□□ 0.76
Trnp1Q80ZI1 Gm43347-201ENSMUST00000200226 580 ntBASIC19.78■□□□□ 0.76
Trnp1Q80ZI1 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC19.78■□□□□ 0.76
Trnp1Q80ZI1 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trnp1Q80ZI1 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Trnp1Q80ZI1 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trnp1Q80ZI1 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trnp1Q80ZI1 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trnp1Q80ZI1 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trnp1Q80ZI1 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Trnp1Q80ZI1 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trnp1Q80ZI1 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Trnp1Q80ZI1 Notumos-201ENSMUST00000151998 2659 ntBASIC19.78■□□□□ 0.76
Trnp1Q80ZI1 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Trnp1Q80ZI1 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trnp1Q80ZI1 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trnp1Q80ZI1 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trnp1Q80ZI1 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Trnp1Q80ZI1 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trnp1Q80ZI1 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trnp1Q80ZI1 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trnp1Q80ZI1 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trnp1Q80ZI1 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trnp1Q80ZI1 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
Trnp1Q80ZI1 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Trnp1Q80ZI1 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trnp1Q80ZI1 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC19.76■□□□□ 0.75
Trnp1Q80ZI1 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trnp1Q80ZI1 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trnp1Q80ZI1 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Trnp1Q80ZI1 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Trnp1Q80ZI1 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trnp1Q80ZI1 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trnp1Q80ZI1 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trnp1Q80ZI1 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trnp1Q80ZI1 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC19.76■□□□□ 0.75
Trnp1Q80ZI1 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trnp1Q80ZI1 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC19.76■□□□□ 0.75
Trnp1Q80ZI1 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trnp1Q80ZI1 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trnp1Q80ZI1 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trnp1Q80ZI1 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Trnp1Q80ZI1 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Trnp1Q80ZI1 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Trnp1Q80ZI1 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trnp1Q80ZI1 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Trnp1Q80ZI1 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Trnp1Q80ZI1 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC19.75■□□□□ 0.75
Trnp1Q80ZI1 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC19.75■□□□□ 0.75
Trnp1Q80ZI1 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Trnp1Q80ZI1 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Trnp1Q80ZI1 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Trnp1Q80ZI1 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trnp1Q80ZI1 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trnp1Q80ZI1 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trnp1Q80ZI1 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Trnp1Q80ZI1 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms