Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Upk3bQ80YF6 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Upk3bQ80YF6 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Upk3bQ80YF6 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Upk3bQ80YF6 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC14.86□□□□□ -0.03
Upk3bQ80YF6 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Upk3bQ80YF6 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Upk3bQ80YF6 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
Upk3bQ80YF6 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Upk3bQ80YF6 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Upk3bQ80YF6 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Upk3bQ80YF6 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Upk3bQ80YF6 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Upk3bQ80YF6 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Upk3bQ80YF6 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Upk3bQ80YF6 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Upk3bQ80YF6 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Upk3bQ80YF6 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Upk3bQ80YF6 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Upk3bQ80YF6 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Upk3bQ80YF6 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Upk3bQ80YF6 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Upk3bQ80YF6 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Upk3bQ80YF6 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Upk3bQ80YF6 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Upk3bQ80YF6 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Upk3bQ80YF6 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Upk3bQ80YF6 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Upk3bQ80YF6 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Upk3bQ80YF6 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Upk3bQ80YF6 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Upk3bQ80YF6 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Upk3bQ80YF6 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Upk3bQ80YF6 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC14.85□□□□□ -0.03
Upk3bQ80YF6 Gm45244-201ENSMUST00000211328 2200 ntBASIC14.85□□□□□ -0.03
Upk3bQ80YF6 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Upk3bQ80YF6 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Upk3bQ80YF6 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Upk3bQ80YF6 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Upk3bQ80YF6 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC14.85□□□□□ -0.03
Upk3bQ80YF6 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Upk3bQ80YF6 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
Upk3bQ80YF6 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC14.85□□□□□ -0.03
Upk3bQ80YF6 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Upk3bQ80YF6 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Upk3bQ80YF6 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Upk3bQ80YF6 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Upk3bQ80YF6 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC14.84□□□□□ -0.03
Upk3bQ80YF6 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Upk3bQ80YF6 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Upk3bQ80YF6 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Upk3bQ80YF6 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Upk3bQ80YF6 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Upk3bQ80YF6 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Upk3bQ80YF6 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Upk3bQ80YF6 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Upk3bQ80YF6 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Upk3bQ80YF6 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Upk3bQ80YF6 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Upk3bQ80YF6 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Upk3bQ80YF6 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Upk3bQ80YF6 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Upk3bQ80YF6 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Upk3bQ80YF6 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Upk3bQ80YF6 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Upk3bQ80YF6 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Upk3bQ80YF6 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Upk3bQ80YF6 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Upk3bQ80YF6 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Upk3bQ80YF6 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Upk3bQ80YF6 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Upk3bQ80YF6 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Upk3bQ80YF6 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Upk3bQ80YF6 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Upk3bQ80YF6 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Upk3bQ80YF6 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Upk3bQ80YF6 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Upk3bQ80YF6 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Upk3bQ80YF6 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC14.83□□□□□ -0.04
Upk3bQ80YF6 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Upk3bQ80YF6 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Upk3bQ80YF6 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Upk3bQ80YF6 Gm43548-201ENSMUST00000197139 2353 ntBASIC14.83□□□□□ -0.04
Upk3bQ80YF6 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC14.83□□□□□ -0.04
Upk3bQ80YF6 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Upk3bQ80YF6 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Upk3bQ80YF6 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Upk3bQ80YF6 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Upk3bQ80YF6 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Upk3bQ80YF6 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Upk3bQ80YF6 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Upk3bQ80YF6 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Upk3bQ80YF6 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Upk3bQ80YF6 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Upk3bQ80YF6 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC14.82□□□□□ -0.04
Upk3bQ80YF6 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC14.82□□□□□ -0.04
Upk3bQ80YF6 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Upk3bQ80YF6 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Upk3bQ80YF6 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Upk3bQ80YF6 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms