Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim62Q80V85 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trim62Q80V85 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim62Q80V85 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Trim62Q80V85 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trim62Q80V85 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim62Q80V85 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim62Q80V85 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim62Q80V85 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim62Q80V85 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim62Q80V85 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trim62Q80V85 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim62Q80V85 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trim62Q80V85 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trim62Q80V85 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim62Q80V85 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim62Q80V85 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.15■□□□□ 0.5
Trim62Q80V85 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim62Q80V85 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trim62Q80V85 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trim62Q80V85 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim62Q80V85 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC18.15■□□□□ 0.5
Trim62Q80V85 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trim62Q80V85 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.15■□□□□ 0.5
Trim62Q80V85 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim62Q80V85 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim62Q80V85 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim62Q80V85 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.15■□□□□ 0.5
Trim62Q80V85 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim62Q80V85 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim62Q80V85 Grk6-206ENSMUST00000224995 2971 ntBASIC18.15■□□□□ 0.5
Trim62Q80V85 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim62Q80V85 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim62Q80V85 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Trim62Q80V85 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
Trim62Q80V85 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Trim62Q80V85 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim62Q80V85 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim62Q80V85 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trim62Q80V85 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.14■□□□□ 0.49
Trim62Q80V85 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim62Q80V85 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC18.14■□□□□ 0.49
Trim62Q80V85 Mir5122-201ENSMUST00000175004 89 ntBASIC18.14■□□□□ 0.49
Trim62Q80V85 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim62Q80V85 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim62Q80V85 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.14■□□□□ 0.49
Trim62Q80V85 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim62Q80V85 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim62Q80V85 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim62Q80V85 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trim62Q80V85 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trim62Q80V85 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim62Q80V85 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim62Q80V85 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trim62Q80V85 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trim62Q80V85 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Trim62Q80V85 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trim62Q80V85 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim62Q80V85 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC18.13■□□□□ 0.49
Trim62Q80V85 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim62Q80V85 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC18.13■□□□□ 0.49
Trim62Q80V85 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trim62Q80V85 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC18.13■□□□□ 0.49
Trim62Q80V85 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trim62Q80V85 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim62Q80V85 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trim62Q80V85 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Trim62Q80V85 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim62Q80V85 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trim62Q80V85 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.13■□□□□ 0.49
Trim62Q80V85 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim62Q80V85 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Trim62Q80V85 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim62Q80V85 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim62Q80V85 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Trim62Q80V85 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim62Q80V85 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trim62Q80V85 Gm24841-201ENSMUST00000158676 357 ntBASIC18.12■□□□□ 0.49
Trim62Q80V85 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim62Q80V85 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Trim62Q80V85 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim62Q80V85 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Trim62Q80V85 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Trim62Q80V85 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim62Q80V85 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim62Q80V85 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Trim62Q80V85 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim62Q80V85 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim62Q80V85 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trim62Q80V85 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim62Q80V85 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim62Q80V85 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.11■□□□□ 0.49
Trim62Q80V85 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim62Q80V85 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trim62Q80V85 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18.11■□□□□ 0.49
Trim62Q80V85 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC18.11■□□□□ 0.49
Trim62Q80V85 Gm21814-202ENSMUST00000203277 873 ntBASIC18.11■□□□□ 0.49
Trim62Q80V85 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC18.11■□□□□ 0.49
Trim62Q80V85 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trim62Q80V85 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms