Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Rfx4Q7TNK1 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rfx4Q7TNK1 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.87■□□□□ 0.29
Rfx4Q7TNK1 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rfx4Q7TNK1 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rfx4Q7TNK1 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Rfx4Q7TNK1 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rfx4Q7TNK1 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rfx4Q7TNK1 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rfx4Q7TNK1 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rfx4Q7TNK1 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rfx4Q7TNK1 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Rfx4Q7TNK1 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rfx4Q7TNK1 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rfx4Q7TNK1 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rfx4Q7TNK1 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rfx4Q7TNK1 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rfx4Q7TNK1 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rfx4Q7TNK1 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rfx4Q7TNK1 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rfx4Q7TNK1 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rfx4Q7TNK1 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rfx4Q7TNK1 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rfx4Q7TNK1 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Rfx4Q7TNK1 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rfx4Q7TNK1 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Rfx4Q7TNK1 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rfx4Q7TNK1 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rfx4Q7TNK1 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rfx4Q7TNK1 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rfx4Q7TNK1 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rfx4Q7TNK1 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rfx4Q7TNK1 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rfx4Q7TNK1 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rfx4Q7TNK1 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rfx4Q7TNK1 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.85■□□□□ 0.29
Rfx4Q7TNK1 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Rfx4Q7TNK1 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rfx4Q7TNK1 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rfx4Q7TNK1 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rfx4Q7TNK1 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rfx4Q7TNK1 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC16.85■□□□□ 0.29
Rfx4Q7TNK1 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rfx4Q7TNK1 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rfx4Q7TNK1 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rfx4Q7TNK1 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Rfx4Q7TNK1 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.84■□□□□ 0.29
Rfx4Q7TNK1 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rfx4Q7TNK1 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rfx4Q7TNK1 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.84■□□□□ 0.29
Rfx4Q7TNK1 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rfx4Q7TNK1 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rfx4Q7TNK1 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Rfx4Q7TNK1 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rfx4Q7TNK1 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC16.84■□□□□ 0.29
Rfx4Q7TNK1 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rfx4Q7TNK1 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC16.84■□□□□ 0.29
Rfx4Q7TNK1 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rfx4Q7TNK1 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rfx4Q7TNK1 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rfx4Q7TNK1 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC16.84■□□□□ 0.29
Rfx4Q7TNK1 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rfx4Q7TNK1 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rfx4Q7TNK1 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rfx4Q7TNK1 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rfx4Q7TNK1 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rfx4Q7TNK1 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.84■□□□□ 0.29
Rfx4Q7TNK1 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Rfx4Q7TNK1 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rfx4Q7TNK1 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Rfx4Q7TNK1 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Rfx4Q7TNK1 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Rfx4Q7TNK1 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
Rfx4Q7TNK1 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC16.83■□□□□ 0.28
Rfx4Q7TNK1 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rfx4Q7TNK1 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rfx4Q7TNK1 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC16.83■□□□□ 0.28
Rfx4Q7TNK1 Gm27454-201ENSMUST00000185090 204 ntBASIC16.83■□□□□ 0.28
Rfx4Q7TNK1 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rfx4Q7TNK1 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.83■□□□□ 0.28
Rfx4Q7TNK1 Appbp2os-202ENSMUST00000206972 447 ntBASIC16.83■□□□□ 0.28
Rfx4Q7TNK1 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rfx4Q7TNK1 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rfx4Q7TNK1 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rfx4Q7TNK1 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rfx4Q7TNK1 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rfx4Q7TNK1 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Rfx4Q7TNK1 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Rfx4Q7TNK1 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rfx4Q7TNK1 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
Rfx4Q7TNK1 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Rfx4Q7TNK1 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.83■□□□□ 0.28
Rfx4Q7TNK1 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Rfx4Q7TNK1 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfx4Q7TNK1 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rfx4Q7TNK1 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfx4Q7TNK1 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rfx4Q7TNK1 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rfx4Q7TNK1 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfx4Q7TNK1 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms